RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CASC1Q6TDU7 716 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 KDELC1Q6UW63 502 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF534Q76KX8 674 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 PIGWQ7Z7B1 504 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF410Q86VK4 478 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 FOXP4Q8IVH2 680 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SERPINA12Q8IW75 414 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ANKRD13CQ8N6S4 541 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 EMC1Q8N766 993 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF611Q8N823 705 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC38A9Q8NBW4 561 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 FBXO30Q8TB52 745 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 HMGCLL1Q8TB92 370 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 LNX1Q8TBB1 728 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPATA18Q8TC71 538 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 RNASE8Q8TDE3 154 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 MOB3AQ96BX8 217 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM19Q96HH6 336 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 GDAP1L1Q96MZ0 367 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPATA13Q96N96 652 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC22A12Q96S37 553 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 CMKLR1Q99788 373 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SEMA3CQ99985 751 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 C16orf70Q9BSU1 422 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 LSG1Q9H089 658 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 C6orf106Q9H6K1 298 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 MYNNQ9NPC7 610 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLCO1C1Q9NYB5 712 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPASTQ9UBP0 616 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 TRMT6Q9UJA5 497 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ABT1Q9ULW3 272 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 EXOC7Q9UPT5 735 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 PADI2Q9Y2J8 665 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 LOXL2Q9Y4K0 774 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 LILRA5A6NI73 299 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 DUXAA6NLW8 204 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 ACOT8O14734 319 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 TO15178 435 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 KCNN4O15554 427 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 PPIP5K2O43314 1243 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 PEX11AO75192 247 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 SBK2P0C263 348 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 HLA-DOBP13765 273 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 ITGB6P18564 788 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 RPA1P27694 616 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 PSMB4P28070 264 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC6A6P31641 620 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRPHP41219 470 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 LHX1P48742 406 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 SERPINH1P50454 418 aaKnown RBP4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 CLDN20P56880 219 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 RUNX1T1Q06455 604 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 NEK5Q6P3R8 708 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 MEX3BQ6ZN04 569 aaKnown RBP4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM219Q86XT9 240 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 ELMOD2Q8IZ81 293 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 KDM8Q8N371 416 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF441Q8N8Z8 693 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 OR52E1Q8NGJ3 308 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 THAP6Q8TBB0 222 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 FIG4Q92562 907 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 PKP2Q99959 881 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 FNDC11Q9BVV2 318 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 C1QTNF4Q9BXJ3 329 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 DPH5Q9H2P9 285 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 DPAGT1Q9H3H5 408 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 RHCGQ9UBD6 479 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 ITM2BQ9Y287 266 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 AMDHD2Q9Y303 409 aa4.22□□□□□ -1.73
HMGB1P48-201ENST00000446155 CGNL1Q0VF96 1302 aa4.21□□□□□ -1.73
HMGB1P48-201ENST00000446155 TRBV2A0A0J9YWF9 115 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 KBTBD13C9JR72 458 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 TULP2O00295 520 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 CACNB4O00305 520 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 HS3ST1O14792 307 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 RASGRF2O14827 1237 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 CTDSPLO15194 276 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GLCEO94923 617 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 TGFAP01135 160 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 MPZP25189 248 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 SFNP31947 248 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 SLC9A3P48764 834 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 RGS7P49802 495 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 DLK1P80370 383 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 HMGN5P82970 282 aaKnown RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 FOLH1Q04609 750 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 ZBTB17Q13105 803 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 TRADDQ15628 312 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 MAPK11Q15759 364 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GAGE2EQ4V326 116 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 RAB6CQ53S08 254 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 GAGE2AQ6NT46 116 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 C1orf186Q6ZWK4 172 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 Q75L30 129 aa4.21□□□□□ -1.74
HMGB1P48-201ENST00000446155 PRSS42Q7Z5A4 293 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms