RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 A0A1W2PQM1 296 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 GSAPA4D1B5 854 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 EME2A4GXA9 379 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 SYCE1LA8MT33 242 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 AGRPO00253 132 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ITM2AO43736 263 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 NUDT21O43809 227 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 PRICKLE3O43900 615 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 SMIM24O75264 130 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 LYPLA1O75608 230 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 IPO13O94829 963 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 WDR47O94967 919 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 LDOC1O95751 146 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 S100BP04271 92 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 PROS1P07225 676 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 HIST1H2AGP0C0S8 130 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 CKMT1AP12532 417 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 GLB1P16278 677 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 UGT2B7P16662 529 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 TAC1P20366 129 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 HIST1H2ADP20671 130 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 MPSTP25325 297 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SHMT2P34897 504 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ACADVLP49748 655 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 PRKAA2P54646 552 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ALDH18A1P54886 795 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 CCL7P80098 99 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 NFKB2Q00653 900 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 NR1D2Q14995 579 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 CHI3L2Q15782 390 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ZNF678Q5SXM1 525 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 HHATQ5VTY9 493 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 PRAMEF13Q5VWM6 474 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ANKS6Q68DC2 871 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 TTC19Q6DKK2 380 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 TTC23LQ6PF05 361 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 USP53Q70EK8 1073 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 GOLGA7Q7Z5G4 137 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SPRED1Q7Z699 444 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 PIP4P1Q86T03 277 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 THOC6Q86W42 341 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 CNPY4Q8N129 248 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 TEX9Q8N6V9 391 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 CCNYL1Q8N7R7 359 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 DCBLD1Q8N8Z6 715 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SNX31Q8N9S9 440 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 RDH11Q8TC12 318 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 IFI44Q8TCB0 444 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 MAGEC3Q8TD91 643 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 HIST1H2AHQ96KK5 128 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 OR2A14Q96R47 310 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 MIPEPQ99797 713 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 HIST1H2AJQ99878 128 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 CCDC3Q9BQI4 270 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 H2AFJQ9BTM1 129 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SGPP1Q9BX95 441 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SHCBP1LQ9BZQ2 653 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ABCG4Q9H172 646 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SPNS1Q9H2V7 528 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 GSTO2Q9H4Y5 243 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 STN1Q9H668 368 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 SYNDIG1Q9H7V2 258 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 CNOT10Q9H9A5 744 aaKnown RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 UCK1Q9HA47 277 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 TNFRSF12AQ9NP84 129 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SLC6A20Q9NP91 592 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
MDC1-203ENST00000417033 KCNK4Q9NYG8 393 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 NKIRAS1Q9NYS0 192 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 ACTR10Q9NZ32 417 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 TAC3Q9UHF0 121 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 PCTPQ9UKL6 214 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 SLC22A14Q9Y267 594 aa7.79□□□□□ -1.16
MDC1-203ENST00000417033 BPTFQ12830 3046 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 GVINP1Q7Z2Y8 2422 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 IGKV1-8A0A0C4DH67 115 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 CCDC189A1A4V9 331 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 PIPSLA2A3N6 862 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 PABPN1LA6NDY0 278 aaKnown RBP7.78□□□□□ -1.16
MDC1-203ENST00000417033 OR5K3A6NET4 321 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 ISM1B1AKI9 464 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 STX16-NPEPL1H3BU86 382 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 E2F3O00716 465 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 UBFD1O14562 309 aaKnown RBP7.78□□□□□ -1.16
MDC1-203ENST00000417033 STX16O14662 325 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 GIPC1O14908 333 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 KIF1CO43896 1103 aaKnown RBP7.78□□□□□ -1.16
MDC1-203ENST00000417033 STK16O75716 305 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 UBXN7O94888 489 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
MDC1-203ENST00000417033 RPLP0P05388 317 aaKnown RBP7.78□□□□□ -1.16
MDC1-203ENST00000417033 CHRNGP07510 517 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 CDH1P12830 882 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 CKMT2P17540 419 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 AMD1P17707 334 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 CD22P20273 847 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 VARSP26640 1264 aaKnown RBP7.78□□□□□ -1.16
MDC1-203ENST00000417033 CD1CP29017 333 aa7.78□□□□□ -1.16
MDC1-203ENST00000417033 PRDX3P30048 256 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms