RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CHRNA9Q9UGM1 479 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 WARS2Q9UGM6 360 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NOCTQ9UK39 431 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DBR1Q9UK59 544 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 AMFRQ9UKV5 643 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PADI1Q9ULC6 663 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 VPS4AQ9UN37 437 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PCDHA12Q9UN75 941 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RPH3ALQ9UNE2 315 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PPIEQ9UNP9 301 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ABCG2Q9UNQ0 655 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SHOC2Q9UQ13 582 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NIP7Q9Y221 180 aaKnown RBP eCLIP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PADI2Q9Y2J8 665 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 COQ6Q9Y2Z9 468 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ACOT9Q9Y305 439 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 AAR2Q9Y312 384 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 REXO2Q9Y3B8 237 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PCDHAC2Q9Y5I4 1007 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 KCNE2Q9Y6J6 123 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CSNK1G3Q9Y6M4 447 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CECR2Q9BXF3 1484 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GRIN2DO15399 1336 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 XDHP47989 1333 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ADGRF5Q8IZF2 1346 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TRAV25A0A0B4J276 109 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 A0A0G2JLW4 131 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 A0A1W2PPV4 95 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ARHGAP42A6NI28 874 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ASB14A6NK59 587 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ANXA2P2A6NMY6 339 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF729A6NN14 1252 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CDRT15L2A8MXV6 281 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 A8MZ25 164 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 LRRN3E7EW58 273 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 HS3ST1O14792 307 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SCAMP2O15127 329 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CHADO15335 359 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 EIF3HO15372 352 aaKnown RBP eCLIP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CLOCKO15516 846 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RNMTO43148 476 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ATG13O75143 517 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CDH16O75309 829 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SAP30O75446 220 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RASSF9O75901 435 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 UNC5CO95185 931 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SNAP29O95721 258 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 MT-ND2P03891 347 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 MT-ND5P03915 603 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SERPING1P05155 500 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 GPIP06744 558 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CHRM5P08912 532 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SPARCP09486 303 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 OR2T7P0C7T2 308 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 KITP10721 976 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 MCF2P10911 925 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PEPDP12955 493 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CCNB1P14635 433 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 FOSL2P15408 326 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 NQO2P16083 231 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 HK1P19367 917 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 EN2P19622 333 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF10P21506 573 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CNR1P21554 472 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RBL1P28749 1068 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CDH5P33151 784 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TGM4P49221 684 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 HNRNPFP52597 415 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 STAT2P52630 851 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CDH8P55286 799 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SOX8P57073 446 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DCDC1P59894 354 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 AP1S1P61966 158 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RPL7AP62424 266 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 REEP5Q00765 189 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ECT2LQ008S8 904 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 OCA2Q04671 838 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SCAPQ12770 1279 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PEX6Q13608 980 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 VEZF1Q14119 521 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 IL11RAQ14626 422 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DRAP1Q14919 205 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PDK3Q15120 406 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PGM5Q15124 567 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 LTB4RQ15722 352 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PDK4Q16654 411 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TMEM44Q2T9K0 475 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 GOLGA7BQ2TAP0 167 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 AP5B1Q2VPB7 878 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 C3orf36Q3SXR2 165 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CHRFAM7AQ494W8 412 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 NRN1LQ496H8 165 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TAF1BQ53T94 588 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CMPK2Q5EBM0 449 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF789Q5FWF6 425 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TTC38Q5R3I4 469 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SLC35F1Q5T1Q4 408 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CCNYL2Q5T2Q4 361 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 MBNL2Q5VZF2 373 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 WSCD1Q658N2 575 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms