RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 DISP3Q9P2K9 1392 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 HHLA1C9JL84 531 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CCDC188H7C350 402 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 O00370 1275 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 KLF11O14901 512 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 SOCS5O75159 536 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 DFFBO76075 338 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 RECQL5O94762 991 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 AP2A2O94973 939 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CSN3P07498 182 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CYP11B2P19099 503 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CD22P20273 847 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 POLR2LP62875 67 aaKnown RBP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 KCNJ10P78508 379 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ACSM1Q08AH1 577 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF415Q09FC8 603 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 COG2Q14746 738 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 C20orf194Q5TEA3 1177 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ADAM5Q6NVV9 412 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZBTB49Q6ZSB9 765 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 SLC16A9Q7RTY1 509 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF611Q8N823 705 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 THAP8Q8NA92 274 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 OR6J1Q8NGC5 347 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 DYRK2Q92630 601 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 FAM20AQ96MK3 541 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CPNE1Q99829 537 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ASCL2Q99929 193 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 BAG1Q99933 345 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ANKRD2Q9GZV1 360 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CPVLQ9H3G5 476 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 Q9H8V8 135 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CDH20Q9HBT6 801 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ZNF71Q9NQZ8 489 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 DDX43Q9NXZ2 648 aaKnown RBP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 CPSF3Q9UKF6 684 aaKnown RBP3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 RIPK3Q9Y572 518 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ARHGEF5Q12774 1597 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 MAST1Q9Y2H9 1570 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 ABCA9Q8IUA7 1624 aa3.41□□□□□ -1.86
HMGB1P11-201ENST00000413899 C2orf81A6NN90 581 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ENO4A6NNW6 628 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 H7C0S8 307 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZNF197O14709 1029 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 UNC13BO14795 1591 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 PLXNC1O60486 1568 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 GPIP06744 558 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR52Z1P0C646 297 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 GP1BBP13224 206 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 CEACAM1P13688 526 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 EPCAMP16422 314 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ERCC2P18074 760 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 CLDN15P56746 228 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 CDR2Q01850 454 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 TAF10Q12962 218 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 NPTX1Q15818 432 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 MRGPRG-AS1Q2M3A8 158 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 HYAL4Q2M3T9 481 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 MCMDC2Q4G0Z9 681 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 C1orf141Q5JVX7 400 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 OTUD3Q5T2D3 398 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 KRT39Q6A163 491 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 PSRC1Q6PGN9 363 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ARHGAP22Q7Z5H3 698 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 MFN1Q8IWA4 741 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 WDSUB1Q8N9V3 476 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZBTB8BQ8NAP8 495 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR2T11Q8NH01 316 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 VPS33AQ96AX1 596 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 SPSB1Q96BD6 273 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 NAA11Q9BSU3 229 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 BARHL1Q9BZE3 327 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 OR2B2Q9GZK3 357 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ST6GALNAC4Q9H4F1 302 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 GRID1Q9ULK0 1009 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 STUB1Q9UNE7 303 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 ADGRL2O95490 1459 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 CAMSAP2Q08AD1 1489 aa3.4□□□□□ -1.87
HMGB1P11-201ENST00000413899 INO80Q9ULG1 1556 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 HFM1A2PYH4 1435 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 TROQ12816 1431 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 IGHV4-4A0A075B6R2 117 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 A0A1W2PPK0 400 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 MSGN1A6NI15 193 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 PSMD14O00487 310 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 ARPC2O15144 300 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 KHDRBS3O75525 346 aaKnown RBP3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 IRF2P14316 349 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 CEBPBP17676 345 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 CDH3P22223 829 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 MAP2K2P36507 400 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 MAGEA11P43364 429 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 ZNF41P51814 821 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 PMP22Q01453 160 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 KLC1Q07866 573 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 ITGA9Q13797 1035 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 GTDC1Q4AE62 458 aa3.39□□□□□ -1.87
HMGB1P11-201ENST00000413899 XKR6Q5GH73 641 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms