RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CASC4Q6P4E1 433 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 SLC27A1Q6PCB7 646 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 FAM198BQ6UWH4 519 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 RGS9BPQ6ZS82 235 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 CREB3L2Q70SY1 520 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 ARMC9Q7Z3E5 817 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 EXOC3L1Q86VI1 746 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 FBXW8Q8N3Y1 598 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GBGT1Q8N5D6 347 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 PAPD5Q8NDF8 572 aaKnown RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 EXD1Q8NHP7 514 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 LRRC8CQ8TDW0 803 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 TMEM255BQ8WV15 326 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 ATL1Q8WXF7 558 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 SMPDL3BQ92485 455 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 SNRNP40Q96DI7 357 aaKnown RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 PKP2Q99959 881 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 RWDD1Q9H446 243 aaPredicted RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 MINDY3Q9H8M7 445 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 OSER1Q9NX31 292 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 RABL2AQ9UBK7 228 aaPredicted RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 SPASTQ9UBP0 616 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 MALT1Q9UDY8 824 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 CTNNA3Q9UI47 895 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GMEB2Q9UKD1 530 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 VDAC3Q9Y277 283 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 DLGAP4Q9Y2H0 992 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 STRAPQ9Y3F4 350 aaKnown RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 YIPF1Q9Y548 306 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 C13orf42A0A1B0GVH6 325 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 TMEM221A6NGB7 291 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 KPNA7A9QM74 516 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 HNRNPCL2B2RXH8 293 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 RIPK2O43353 540 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 OR10H2O60403 315 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 SELENOFO60613 162 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 BMP10O95393 424 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 NTN1O95631 604 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 DANCRP0C864 163 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 GM2AP17900 193 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 ASMTP46597 345 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 IFNAR2P48551 515 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 DSCR9P59020 149 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 PTENP60484 403 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 PRKCEQ02156 737 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
LSM5-206ENST00000409987 ZBTB17Q13105 803 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 SNTA1Q13424 505 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 SLC39A14Q15043 492 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 CES4AQ5XG92 561 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 OR7E24Q6IFN5 339 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 TOM1L2Q6ZVM7 507 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 MEPCEQ7L2J0 689 aaKnown RBP4.86□□□□□ -1.63
LSM5-206ENST00000409987 TLK2Q86UE8 772 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 KMT5CQ86Y97 462 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 ELMOD2Q8IZ81 293 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 NCOA7Q8NI08 942 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 SEMA4DQ92854 862 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 SPDL1Q96EA4 605 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 ALG14Q96F25 216 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 GDAP1L1Q96MZ0 367 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 MUS81Q96NY9 551 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 TMEM204Q9BSN7 226 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 FNDC11Q9BVV2 318 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 LMAN1LQ9HAT1 526 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 RNPEPL1Q9HAU8 725 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 LRRC4Q9HBW1 653 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 FANCFQ9NPI8 374 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 TMEM161AQ9NX61 479 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 MIOSQ9NXC5 875 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 P4HTMQ9NXG6 502 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.86□□□□□ -1.63
LSM5-206ENST00000409987 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
LSM5-206ENST00000409987 CCPG1Q9ULG6 757 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 FAM205AQ6ZU69 1335 aa4.86□□□□□ -1.63
LSM5-206ENST00000409987 EVPLQ92817 2033 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 A0A0A6YYC8 382 aaPredicted RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 TRBV2A0A0J9YWF9 115 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 ELOVL7A1L3X0 281 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 ANKRD66B4E2M5 251 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 I3L1I5 382 aaPredicted RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 CLDN4O14493 209 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 DVL1O14640 695 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 TTI1O43156 1089 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 SMAD6O43541 496 aaKnown RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 BUD23O43709 281 aaKnown RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 ZBTB11O95625 1053 aaPredicted RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 PPP1R3DO95685 299 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 C8orf89P0DMQ9 161 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 CDH1P12830 882 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 PBLDP30039 288 aaPredicted RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 SFNP31947 248 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 MAGEA4P43358 317 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 ARCN1P48444 511 aaKnown RBP4.85□□□□□ -1.63
LSM5-206ENST00000409987 UCP2P55851 309 aa4.85□□□□□ -1.63
LSM5-206ENST00000409987 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms