RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TMEM184BQ9Y519 407 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 KLK4Q9Y5K2 254 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 HMX2A2RU54 273 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 PABPN1LA6NDY0 278 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 STK17BO94768 372 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 CRABP2P29373 138 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 CLN3Q13286 438 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 MROH9Q5TGP6 573 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 SPACA3Q8IXA5 215 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 GSPT2Q8IYD1 628 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 PPFIBP2Q8ND30 876 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 UBXN10Q96LJ8 280 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 MIPEPQ99797 713 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 ARL15Q9NXU5 204 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 CTNNAL1Q9UBT7 734 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 KLHL20Q9Y2M5 609 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 IKBKGQ9Y6K9 419 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 ZFHX4Q86UP3 3567 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 CFAP47Q6ZTR5 3102 aa19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 SNRNP200O75643 2136 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-207ENST00000409417 TARM1B6A8C7 271 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 TMEM150CB9EJG8 249 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CDC7O00311 574 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 KLK10O43240 276 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 RIPK2O43353 540 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 INHBAP08476 426 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CCDC166P0CW27 439 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 GRIA3P42263 894 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 TSTA3Q13630 321 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 PPP1R3AQ16821 1122 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 PWWP2BQ6NUJ5 590 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 FIGLAQ6QHK4 219 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 AGTRAPQ6RW13 159 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 MBOAT1Q6ZNC8 495 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CCDC91Q7Z6B0 441 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CMC1Q7Z7K0 106 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 ADAMTSL2Q86TH1 951 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 DNAJC22Q8N4W6 341 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 UHMK1Q8TAS1 419 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 PAFAH2Q99487 392 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 ACAT2Q9BWD1 397 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 TAC3Q9UHF0 121 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 SERTAD3Q9UJW9 196 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 SDK2Q58EX2 2172 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CACNA1BQ00975 2339 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 ADAMTS20P59510 1910 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 NPEPPSL1A6NEC2 478 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 TIAF1O95411 115 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 DLGAP3O95886 979 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 SLC35E2BP0CK96 405 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CMPK1P30085 196 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 GABRA4P48169 554 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 ATP6V0D1P61421 351 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 TLE3Q04726 772 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 PRDX1Q06830 199 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 BMPR2Q13873 1038 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 NAA25Q14CX7 972 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 TGIF1Q15583 401 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 FCRL6Q6DN72 434 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 RAPH1Q70E73 1250 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 SPATA6LQ8N4H0 392 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 OR1L3Q8NH93 324 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 ATL1Q8WXF7 558 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 CCDC177Q9NQR7 707 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 ZNF180Q9UJW8 692 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 SSUH2Q9Y2M2 353 aa19.09■□□□□ 0.65
PDLIM2-207ENST00000409417 PTPRQQ9UMZ3 2332 aa19.08■□□□□ 0.65
PDLIM2-207ENST00000409417 SPTBP11277 2137 aa19.08■□□□□ 0.65
PDLIM2-207ENST00000409417 CCNDBP1O95273 360 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 ZNF28P17035 718 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 SLC26A3P40879 764 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 MSH2P43246 934 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 SERPINB9P50453 376 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 ABATP80404 500 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 TSNQ15631 228 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 ICE2Q659A1 982 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 NLGN4XQ8N0W4 816 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 NLGN4YQ8NFZ3 816 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 N4BP2L2Q92802 583 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 NKD1Q969G9 470 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 FBXL8Q96CD0 374 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 DPH7Q9BTV6 452 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 PCBD2Q9H0N5 130 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 MRPS30Q9NP92 439 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 UTP6Q9NYH9 597 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 PLCL2Q9UPR0 1127 aa19.08■□□□□ 0.64
PDLIM2-207ENST00000409417 EXOC1LA0A1B0GW35 172 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 POC1B-GALNT4F8VUJ3 575 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 HCRTR1O43613 425 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 KRT38O76015 456 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 KIAA0754O94854 1291 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 GUCA1CO95843 209 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 CD1DP15813 335 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 CCND1P24385 295 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 ITPKBP27987 946 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 CSRP3P50461 194 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 ATP1A2P50993 1020 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 ITGA1P56199 1179 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 TBPL1P62380 186 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 YBX1P67809 324 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms