RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TBPL1P62380 186 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 TSTA3Q13630 321 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-204ENST00000401473 SPIDRQ14159 915 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 CDKL4Q5MAI5 379 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 CDCP2Q5VXM1 449 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 SULT1C3Q6IMI6 304 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 DGLUCYQ7Z3D6 616 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 PLXDC1Q8IUK5 500 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 RAB42Q8N4Z0 105 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 ALKBH8Q96BT7 664 aaKnown RBP15.39■□□□□ 0.05
HMGA1-204ENST00000401473 MED8Q96G25 268 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 SGPP1Q9BX95 441 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 POMT2Q9UKY4 750 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 SLC22A14Q9Y267 594 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 ENTPD2Q9Y5L3 495 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 ACTL7BQ9Y614 415 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 IGHV5-51A0A0C4DH38 117 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 IGHV5-10-1A0A0J9YXX1 117 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 PABPN1LA6NDY0 278 aaKnown RBP15.38■□□□□ 0.05
HMGA1-204ENST00000401473 C2orf74A8MZ97 194 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 G3V2L1 256 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 DYNC1I1O14576 645 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 DLX3O60479 287 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 SLC6A12P48065 614 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 HSPA7P48741 367 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 ZFP36L1Q07352 338 aaKnown RBP15.38■□□□□ 0.05
HMGA1-204ENST00000401473 PRKAA1Q13131 559 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 KIR2DS3Q14952 304 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 SF1Q15637 639 aaKnown RBP15.38■□□□□ 0.05
HMGA1-204ENST00000401473 SNAP47Q5SQN1 464 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 TRIM73Q86UV7 250 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 MARCH9Q86YJ5 346 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 SLITRK4Q8IW52 837 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 RCBTB1Q8NDN9 531 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 OR4D9Q8NGE8 314 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 ATL1Q8WXF7 558 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 MOCOSQ96EN8 888 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 ZDHHC12Q96GR4 267 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 NUDT4Q9NZJ9 180 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 SH2B3Q9UQQ2 575 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 LAMA5O15230 3695 aa15.38■□□□□ 0.05
HMGA1-204ENST00000401473 MN1Q10571 1320 aaPredicted RBP15.38■□□□□ 0.05
HMGA1-204ENST00000401473 A8MU76 341 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 SIX3O95343 332 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 GFAPP14136 432 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 OAS2P29728 719 aaKnown RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 CCDC153Q494R4 210 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 KIAA1614Q5VZ46 1190 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 SPESP1Q6UW49 350 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 CHCHD4Q8N4Q1 142 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ADAMTS14Q8WXS8 1223 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 FAM111AQ96PZ2 611 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 MIPEPQ99797 713 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 KLHL25Q9H0H3 589 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 TAC3Q9UHF0 121 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 KLHL20Q9Y2M5 609 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 IGKV1-8A0A0C4DH67 115 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 PVRP15151 417 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ETV4P43268 484 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ALDH18A1P54886 795 aaKnown RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 PRDX1Q06830 199 aaKnown RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 SETDB1Q15047 1291 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 AGBL2Q5U5Z8 902 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ARMC6Q6NXE6 501 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ARHGAP22Q7Z5H3 698 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 RAB44Q7Z6P3 723 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 FBXO39Q8N4B4 442 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ARMC2Q8NEN0 867 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 OR2L3Q8NG85 312 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 WDR48Q8TAF3 677 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 SLC22A18Q96BI1 424 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ATP6V1G3Q96LB4 118 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 PITPNM3Q9BZ71 974 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 CD244Q9BZW8 370 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 STMN4Q9H169 189 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 SSU72Q9NP77 194 aaKnown RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 CCDC177Q9NQR7 707 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ACSS2Q9NR19 701 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 PCDHB11Q9Y5F2 797 aa15.37■□□□□ 0.05
HMGA1-204ENST00000401473 ZFHX4Q86UP3 3567 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 ZNF839A8K0R7 811 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 A8MT66 165 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 AGRPO00253 132 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 MATN2O00339 956 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 STK16O75716 305 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 THRAP10827 490 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 CDK4P11802 303 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 CLPPQ16740 277 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-204ENST00000401473 HES3Q5TGS1 186 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 CAPN13Q6MZZ7 669 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-204ENST00000401473 RBM44Q6ZP01 1051 aaKnown RBP15.36■□□□□ 0.05
HMGA1-204ENST00000401473 THOC6Q86W42 341 aaKnown RBP15.36■□□□□ 0.05
HMGA1-204ENST00000401473 PTGR2Q8N8N7 351 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-204ENST00000401473 WWOXQ9NZC7 414 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 SEMA5BQ9P283 1151 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 WASF3Q9UPY6 502 aa15.36■□□□□ 0.05
HMGA1-204ENST00000401473 FAM149AA5PLN7 773 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 SLC9B1P1A6NJY1 282 aa15.35■□□□□ 0.05
HMGA1-204ENST00000401473 PRPF4O43172 522 aaKnown RBP eCLIP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms