RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 INPP5KQ9BT40 448 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 SH3BGRLO75368 114 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 TCF3P15923 654 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 MTHFRP42898 656 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 POLR2LP62875 67 aaKnown RBP23.12■■□□□ 1.29
PABPN1-202ENST00000397276 NKG7Q16617 165 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 PRR23BQ6ZRT6 265 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 NCCRP1Q6ZVX7 275 aaPredicted RBP23.12■■□□□ 1.29
PABPN1-202ENST00000397276 NCLNQ969V3 563 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 FAM162AQ96A26 154 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 EMILIN2Q9BXX0 1053 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 SPHK2Q9NRA0 654 aa23.12■■□□□ 1.29
PABPN1-202ENST00000397276 ZNF701M0R085 212 aaPredicted RBP23.11■■□□□ 1.29
PABPN1-202ENST00000397276 RAP2AP10114 183 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 ELK4P28324 431 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 CLEC4FQ8N1N0 589 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 GLB1L3Q8NCI6 653 aaPredicted RBP23.11■■□□□ 1.29
PABPN1-202ENST00000397276 ZNF548Q8NEK5 533 aaPredicted RBP23.11■■□□□ 1.29
PABPN1-202ENST00000397276 SGCDQ92629 289 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 DOK1Q99704 481 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 EBPLQ9BY08 206 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 ELOVL7A1L3X0 281 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 CAPGP40121 348 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 LDLRAP1Q5SW96 308 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 HS3ST5Q8IZT8 346 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 LILRA3Q8N6C8 439 aaPredicted RBP23.11■■□□□ 1.29
PABPN1-202ENST00000397276 NEURL2Q9BR09 285 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 RIOK2Q9BVS4 552 aaKnown RBP23.11■■□□□ 1.29
PABPN1-202ENST00000397276 SLC29A3Q9BZD2 475 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 TRNAU1APQ9NX07 287 aaKnown RBP23.11■■□□□ 1.29
PABPN1-202ENST00000397276 SNX6Q9UNH7 406 aa23.11■■□□□ 1.29
PABPN1-202ENST00000397276 C8GP07360 202 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 LINC00271P0C7V0 271 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 DDX39BQ13838 428 aaKnown RBP23.1■■□□□ 1.29
PABPN1-202ENST00000397276 SF1Q15637 639 aaKnown RBP23.1■■□□□ 1.29
PABPN1-202ENST00000397276 ING5Q8WYH8 240 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 ZSWIM3Q96MP5 696 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 PCDH12Q9NPG4 1184 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 A0A1W2PQ67 120 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 UPK1AO00322 258 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 NUAK1O60285 661 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 MOSPD3O75425 235 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 C1QCP02747 245 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 RHOP08100 348 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 NR4A1P22736 598 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 S100A3P33764 101 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 BCAP31P51572 246 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 GSTM4Q03013 218 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 CHIT1Q13231 466 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 RUNDC3AQ59EK9 446 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 ABRAXAS1Q6UWZ7 409 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 CHCHD4Q8N4Q1 142 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 CDC26Q8NHZ8 85 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 MCOLN3Q8TDD5 553 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 CEP44Q9C0F1 390 aa23.1■■□□□ 1.29
PABPN1-202ENST00000397276 DEAF1O75398 565 aaPredicted RBP23.09■■□□□ 1.29
PABPN1-202ENST00000397276 MYCLP1P12525 358 aaPredicted RBP23.09■■□□□ 1.29
PABPN1-202ENST00000397276 POLR2EP19388 210 aaKnown RBP23.09■■□□□ 1.29
PABPN1-202ENST00000397276 CDKN2CP42773 168 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 NFATC3Q12968 1075 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 HEPHQ9BQS7 1158 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 ERVW-1Q9UQF0 538 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 CXCR6O00574 342 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 TULP3O75386 442 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 PRKD3O94806 890 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 CYP2A7P20853 494 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 PHEXP78562 749 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 CYP2A13Q16696 494 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 LRRC70Q7Z2Q7 622 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 BPIFB6Q8NFQ5 453 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 CRISPLD2Q9H0B8 497 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 LTB4R2Q9NPC1 389 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 GPRC5BQ9NZH0 403 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 PPT2Q9UMR5 302 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 ZNF232Q9UNY5 417 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 DENND4CQ5VZ89 1909 aa23.09■■□□□ 1.29
PABPN1-202ENST00000397276 FADS2P1A8MWK0 482 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 CTSLP07711 333 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 SDC1P18827 310 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 PREPP48147 710 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 ITGADQ13349 1161 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 NR1D2Q14995 579 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 ANKRD34AQ69YU3 496 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 METTL2BQ6P1Q9 378 aaKnown RBP23.08■■□□□ 1.29
PABPN1-202ENST00000397276 GALNT18Q6P9A2 607 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 CYP2U1Q7Z449 544 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 ST13P5Q8NFI4 369 aaPredicted RBP23.08■■□□□ 1.29
PABPN1-202ENST00000397276 PCDHGA11Q9Y5H2 935 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 KCNE1BA0A087WTH5 132 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 GNGT2O14610 69 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 CST1P01037 141 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 EEF1B2P24534 225 aaKnown RBP23.08■■□□□ 1.29
PABPN1-202ENST00000397276 SLC6A12P48065 614 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 ARSFP54793 590 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 ZNF420Q8TAQ5 688 aaPredicted RBP23.08■■□□□ 1.29
PABPN1-202ENST00000397276 MED8Q96G25 268 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 MTERF1Q99551 399 aaKnown RBP23.08■■□□□ 1.29
PABPN1-202ENST00000397276 FANCEQ9HB96 536 aa23.08■■□□□ 1.29
PABPN1-202ENST00000397276 DNAJC11Q9NVH1 559 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms