RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 PTCHD3Q3KNS1 767 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 BCL7AQ4VC05 210 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 ZNF789Q5FWF6 425 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 TNFAIP8L3Q5GJ75 292 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 TSTD2Q5T7W7 516 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 FAM198BQ6UWH4 519 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 CES3Q6UWW8 571 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 RBMXL3Q8N7X1 1067 aaKnown RBP18.01■□□□□ 0.47
SNCB-202ENST00000393693 PEX13Q92968 403 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 KLHL25Q9H0H3 589 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 FAM96AQ9H5X1 160 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 PLAC1Q9HBJ0 212 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 C1GALT1Q9NS00 363 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 C20orf96Q9NUD7 363 aaPredicted RBP18.01■□□□□ 0.47
SNCB-202ENST00000393693 EURLQ9NYK6 297 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 MAP10Q9P2G4 905 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 RIMKLBQ9ULI2 386 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 ACTL7BQ9Y614 415 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 COLEC10Q9Y6Z7 277 aa18.01■□□□□ 0.47
SNCB-202ENST00000393693 SPTBN1Q01082 2364 aaKnown RBP18■□□□□ 0.47
SNCB-202ENST00000393693 ZCWPW2A0A1B0GU75 182 aa18■□□□□ 0.47
SNCB-202ENST00000393693 GSAPA4D1B5 854 aa18■□□□□ 0.47
SNCB-202ENST00000393693 BTN3A3O00478 584 aa18■□□□□ 0.47
SNCB-202ENST00000393693 ST6GAL1P15907 406 aa18■□□□□ 0.47
SNCB-202ENST00000393693 NMBRP28336 390 aa18■□□□□ 0.47
SNCB-202ENST00000393693 PREPP48147 710 aa18■□□□□ 0.47
SNCB-202ENST00000393693 XIAPP98170 497 aa18■□□□□ 0.47
SNCB-202ENST00000393693 EFTUD2Q15029 972 aaKnown RBP eCLIP18■□□□□ 0.47
SNCB-202ENST00000393693 SLC6A19Q695T7 634 aa18■□□□□ 0.47
SNCB-202ENST00000393693 KIAA0930Q6ICG6 404 aaPredicted RBP18■□□□□ 0.47
SNCB-202ENST00000393693 TRMT10BQ6PF06 316 aaKnown RBP18■□□□□ 0.47
SNCB-202ENST00000393693 KCNMB4Q86W47 210 aa18■□□□□ 0.47
SNCB-202ENST00000393693 SYTL1Q8IYJ3 562 aa18■□□□□ 0.47
SNCB-202ENST00000393693 CARFQ8N187 725 aa18■□□□□ 0.47
SNCB-202ENST00000393693 OR13C4Q8NGS5 318 aa18■□□□□ 0.47
SNCB-202ENST00000393693 DCAKDQ8WVC6 231 aa18■□□□□ 0.47
SNCB-202ENST00000393693 MTBPQ96DY7 904 aa18■□□□□ 0.47
SNCB-202ENST00000393693 MFSD3Q96ES6 412 aa18■□□□□ 0.47
SNCB-202ENST00000393693 LINC00615Q96LM1 132 aaPredicted RBP18■□□□□ 0.47
SNCB-202ENST00000393693 FERD3LQ96RJ6 166 aa18■□□□□ 0.47
SNCB-202ENST00000393693 TRIM56Q9BRZ2 755 aaKnown RBP18■□□□□ 0.47
SNCB-202ENST00000393693 SRMSQ9H3Y6 488 aa18■□□□□ 0.47
SNCB-202ENST00000393693 CNOT10Q9H9A5 744 aaKnown RBP18■□□□□ 0.47
SNCB-202ENST00000393693 ACTR5Q9H9F9 607 aaPredicted RBP18■□□□□ 0.47
SNCB-202ENST00000393693 FANCEQ9HB96 536 aa18■□□□□ 0.47
SNCB-202ENST00000393693 SLAMF7Q9NQ25 335 aa18■□□□□ 0.47
SNCB-202ENST00000393693 CTNNAL1Q9UBT7 734 aa18■□□□□ 0.47
SNCB-202ENST00000393693 PCSK5Q92824 1860 aa18■□□□□ 0.47
SNCB-202ENST00000393693 SHANK1Q9Y566 2161 aa18■□□□□ 0.47
SNCB-202ENST00000393693 DPM1O60762 260 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 C1QAP02745 245 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 SNRPAP09012 282 aaKnown RBP17.99■□□□□ 0.47
SNCB-202ENST00000393693 PVRP15151 417 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 NDUFS1P28331 727 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 PRDX3P30048 256 aaKnown RBP17.99■□□□□ 0.47
SNCB-202ENST00000393693 PPP2R2AP63151 447 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 TMPRSS15P98073 1019 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 ATP1A4Q13733 1029 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 THOC5Q13769 683 aaKnown RBP17.99■□□□□ 0.47
SNCB-202ENST00000393693 TAF1AQ15573 450 aaPredicted RBP17.99■□□□□ 0.47
SNCB-202ENST00000393693 TUBB8Q3ZCM7 444 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 PHC3Q8NDX5 983 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 ACVR1CQ8NER5 493 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 CALML6Q8TD86 181 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 LCN9Q8WX39 176 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 C19orf60Q96EN9 201 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 DCUN1D1Q96GG9 259 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 CPNE1Q99829 537 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 PCDHGB7Q9Y5F8 929 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 NOTCH2Q04721 2471 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 UNC79Q9P2D8 2635 aa17.99■□□□□ 0.47
SNCB-202ENST00000393693 C2orf81A6NN90 581 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 BTN3A1O00481 513 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 ATXN8OSP0DMR3 200 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 CYP2A7P20853 494 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 HPDP32754 393 aaPredicted RBP17.98■□□□□ 0.47
SNCB-202ENST00000393693 PRLHRP49683 370 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 CBX1P83916 185 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 ILF2Q12905 390 aaKnown RBP17.98■□□□□ 0.47
SNCB-202ENST00000393693 MSLNQ13421 630 aaPredicted RBP17.98■□□□□ 0.47
SNCB-202ENST00000393693 GRTP1Q5TC63 336 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 LMNTD2Q8IXW0 634 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 PRR7Q8TB68 274 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 HM13Q8TCT9 377 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 STYXQ8WUJ0 223 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 TRAPPC9Q96Q05 1148 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 CCM2Q9BSQ5 444 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 FAM167BQ9BTA0 163 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 XKR8Q9H6D3 395 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 SMYD2Q9NRG4 433 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 TREX1Q9NSU2 369 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 CRLS1Q9UJA2 301 aa17.98■□□□□ 0.47
SNCB-202ENST00000393693 RP1L1Q8IWN7 2480 aaPredicted RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 KLHL33A6NCF5 533 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 MROH6A6NGR9 719 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 AGAP14A8MT82 685 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 CXorf49A8MYA2 514 aaPredicted RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 CCL22O00626 93 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 RRP9O43818 475 aaKnown RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 ERVK-10P10266 1014 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms