RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 EIF2AK1Q9BQI3 630 aaKnown RBP-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 LIMD2Q9BT23 127 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 PAXXQ9BUH6 204 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 ULBP2Q9BZM5 246 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 UBQLN3Q9H347 655 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 PROK2Q9HC23 129 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 SMYD2Q9NRG4 433 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 FBXL2Q9UKC9 423 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 PADI3Q9ULW8 664 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 A3GALT2U3KPV4 340 aa-1.02□□□□□ -2.57
RNU6-540P-201ENST00000384622 HECW1Q76N89 1606 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGHV3-38A0A0C4DH36 116 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 A0A1B0GTH9 108 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ESYT2A0FGR8 921 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 AGAP5A6NIR3 686 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 M0R2T5 61 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 EBAG9O00559 213 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 DHHO43323 396 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 SKAP2O75563 359 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZRANB2O95218 330 aaKnown RBP eCLIP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ECDO95905 644 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ANGP03950 147 aaKnown RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGKV1-16P04430 117 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 KRT16P08779 473 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 MMP9P14780 707 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 MAOAP21397 527 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 MSR1P21757 451 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 LMO2P25791 158 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 LHX1P48742 406 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 MT1XP80297 61 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 TNFRSF17Q02223 184 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 GUCY2DQ02846 1103 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 GRB7Q14451 532 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 TAF13Q15543 124 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 RPE65Q16518 533 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 SGCBQ16585 318 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ARHGAP15Q53QZ3 475 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 RRAGBQ5VZM2 374 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 CYB5R2Q6BCY4 276 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 METTL2BQ6P1Q9 378 aaKnown RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 Q6ZPB1 254 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZBTB49Q6ZSB9 765 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 BBS12Q6ZW61 710 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 LRRC70Q7Z2Q7 622 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 LINC01561Q8N1V8 128 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ARIH2OSQ8N7S6 290 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 GANCQ8TET4 914 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZMYND19Q96E35 227 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 METTL2AQ96IZ6 378 aaKnown RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPATA17Q96L03 361 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 LINC00477Q96M19 166 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 NECTIN4Q96NY8 510 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPIN2AQ99865 258 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 SPIN2BQ9BPZ2 258 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 SLC17A9Q9BYT1 436 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 VPS37BQ9H9H4 285 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 PLCE1Q9P212 2302 aa-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 RANBP2P49792 3224 aaKnown RBP-1.03□□□□□ -2.57
RNU6-540P-201ENST00000384622 VWDEQ8N2E2 1590 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 DOPEY2Q9Y3R5 2298 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 USP34Q70CQ2 3546 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 SHTN1A0MZ66 631 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 CCDC189A1A4V9 331 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 VPS37CA5D8V6 355 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 FRG2CA6NGY1 282 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 RPL37AP8A6NKH3 93 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 HSPB2A8KAH6 182 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 GRM8O00222 908 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 RS1O15537 224 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 SPINT2O43291 252 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 SRPX2O60687 465 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 TMCC2O75069 709 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZNF253O75346 499 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 SERPINC1P01008 464 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 MT-ND5P03915 603 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 MT1FP04733 61 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 IFITM1P13164 125 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 IGLL1P15814 213 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 TPSB2P20231 275 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 TNFAIP3P21580 790 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 CCNE1P24864 410 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 DNAJB1P25685 340 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 HTR1BP28222 390 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 RYKP34925 604 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 MDH2P40926 338 aaKnown RBP-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 PCP4P48539 62 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 RPS6KA3P51812 740 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 CLDN17P56750 224 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 CLDN20P56880 219 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 RWDD2BP57060 319 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 HERVK_113P61574 105 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 CSNK2A1P68400 391 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 PRKCEQ02156 737 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 ACY1Q03154 408 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 ZNF177Q13360 481 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 TPSAB1Q15661 275 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 HSPB2Q16082 182 aa-1.04□□□□□ -2.58
RNU6-540P-201ENST00000384622 NDUFAF6Q330K2 333 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms