RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TMEM102Q8N9M5 508 aaPredicted RBP18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC22A18Q96BI1 424 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 FAM136AQ96C01 138 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 CERS2Q96G23 380 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC25A23Q9BV35 468 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 RAB17Q9H0T7 212 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 ACSS2Q9NR19 701 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC17A6Q9P2U8 582 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 FBXO5Q9UKT4 447 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 SRPK3Q9UPE1 567 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 VPS9D1Q9Y2B5 631 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 UTP11Q9Y3A2 253 aaKnown RBP18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 KLK4Q9Y5K2 254 aa18.19■□□□□ 0.5
TMEM88B-201ENST00000378821 PCM1Q15154 2024 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 CCDC88CQ9P219 2028 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 ARGFXA6NJG6 315 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 C9J4A7 227 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 H3BMM5 538 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 RASGRF2O14827 1237 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 ZSCAN9O15535 394 aaPredicted RBP18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 FKBP9O95302 570 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 CTSBP07858 339 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 CD63P08962 238 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 CBSLP0DN79 551 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 PKMP14618 531 aaKnown RBP18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 CBSP35520 551 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 PGDP52209 483 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 GBX1Q14549 363 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 TRADDQ15628 312 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 FAM69BQ5VUD6 431 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 C8orf74Q6P047 294 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 ZNF549Q6P9A3 640 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 TRMT10BQ6PF06 316 aaKnown RBP18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 FBXO36Q8NEA4 188 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 KIF18AQ8NI77 898 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 HMGCLL1Q8TB92 370 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 N4BP2L2Q92802 583 aaPredicted RBP18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC7A5P2Q9GIP4 190 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 GALPQ9UBC7 116 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 PADI2Q9Y2J8 665 aa18.18■□□□□ 0.5
TMEM88B-201ENST00000378821 COL12A1Q99715 3063 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 CCL11P51671 97 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 DCDP81605 110 aaKnown RBP18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 SLC7A5Q01650 507 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 CHAF1BQ13112 559 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 CBLBQ13191 982 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 SSPNQ14714 243 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 DEFB110Q30KQ9 67 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 COLEC12Q5KU26 742 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 MRPL14Q6P1L8 145 aaKnown RBP18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 CNSTQ6PJW8 725 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 OTOAQ7RTW8 1153 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 HPS6Q86YV9 775 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 SPNS2Q8IVW8 549 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 CNTN4Q8IWV2 1026 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 C2CD4AQ8NCU7 369 aaPredicted RBP18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 ZNF285Q96NJ3 590 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 IP6K3Q96PC2 410 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 RAB11FIP5Q9BXF6 653 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 EURLQ9NYK6 297 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 MED16Q9Y2X0 877 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 RELNP78509 3460 aa18.17■□□□□ 0.5
TMEM88B-201ENST00000378821 ESYT3A0FGR9 886 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 TARM1B6A8C7 271 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 HAUS5O94927 633 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 C1orf105O95561 183 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 MAGP20916 626 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 ATP5DP30049 168 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 FCRL6Q6DN72 434 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 ZDHHC24Q6UX98 284 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 MCATQ8IVS2 390 aaKnown RBP18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 FAM20CQ8IXL6 584 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 ZBED8Q8IZ13 594 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 ZNF655Q8N720 491 aaPredicted RBP18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 NOA1Q8NC60 698 aaKnown RBP18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 ZUFSPQ96AP4 578 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 RAD51AP1Q96B01 352 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 PLAAQ9Y263 795 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 ZNF451Q9Y4E5 1061 aa18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 SPENQ96T58 3664 aaKnown RBP18.16■□□□□ 0.5
TMEM88B-201ENST00000378821 E5RI56 91 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CNOT3O75175 753 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 MATN4O95460 622 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CHRM3P20309 590 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 GABRB3P28472 473 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CARSP49589 748 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CLCN7P51798 805 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 RRADP55042 308 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 PLTPP55058 493 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 FRG1Q14331 258 aaKnown RBP18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 NKAIN1Q4KMZ8 207 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 RAB43Q86YS6 212 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 MMGT1Q8N4V1 131 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 LMNTD1Q8N9Z9 388 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 FDCSPQ8NFU4 85 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 OR2Y1Q8NGV0 311 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 CFAP61Q8NHU2 1237 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 GIMAP7Q8NHV1 300 aa18.15■□□□□ 0.5
TMEM88B-201ENST00000378821 FBXO25Q8TCJ0 367 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms