RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 LIX1LQ8IVB5 337 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CEP97Q8IW35 865 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 FCGR1BQ92637 280 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 OR2A14Q96R47 310 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 EIF3KQ9UBQ5 218 aaKnown RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 LEF1Q9UJU2 399 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 RNF6Q9Y252 685 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ATF6P18850 670 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 TIE1P35590 1138 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SOX6P35712 828 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CSHL1Q14406 222 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SYT16Q17RD7 645 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ZC3H12BQ5HYM0 836 aaKnown RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 HS3ST5Q8IZT8 346 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 GLB1L3Q8NCI6 653 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 BLOC1S5Q8TDH9 187 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 UQCC2Q9BRT2 126 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 MCOLN1Q9GZU1 580 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 USP22Q9UPT9 525 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 DSCR3O14972 297 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TLR5O60602 858 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TSPAN3O60637 253 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 GJB5O95377 273 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 LCKP06239 509 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 CYP2A6P11509 494 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TALDO1P37837 337 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 MLLT3P42568 568 aaPredicted RBP11.85□□□□□ -0.51
C9orf3-203ENST00000375315 PPP3CCP48454 512 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TECRLQ5HYJ1 363 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 AGAP9Q5VTM2 703 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 FLCNQ8NFG4 579 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 NCLNQ969V3 563 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 SLC30A2Q9BRI3 323 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 ERVK13-1Q9NX77 482 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TMPRSS11EQ9UL52 423 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 CFL2Q9Y281 166 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 PCDHB14Q9Y5E9 798 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 KCNE2Q9Y6J6 123 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 PCP4L1A6NKN8 68 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 DFNA5O60443 496 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 URODP06132 367 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 ITGAMP11215 1152 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 KCNA5P22460 613 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 NMBRP28336 390 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 MAGEA11P43364 429 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 RPL34P49207 117 aaKnown RBP11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TBX4P57082 545 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 GPR17Q13304 367 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 SNTA1Q13424 505 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 EFR3AQ14156 821 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 RNF135Q8IUD6 432 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 ADHFE1Q8IWW8 467 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TCTE3Q8IZS6 198 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 OR5K1Q8NHB7 308 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TUBGCP3Q96CW5 907 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 BEX2Q9BXY8 128 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 MARCH2Q9P0N8 246 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 DOCK6Q96HP0 2047 aa11.85□□□□□ -0.51
C9orf3-203ENST00000375315 CCDC182A6NF36 153 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ERI2A8K979 691 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 H3BUI4 141 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PLD2O14939 933 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 OR2B3O76000 313 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 JCHAINP01591 159 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 FGBP02675 491 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GADD45AP24522 165 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 CCR1P32246 355 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 EMX2Q04743 252 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 SEMA3BQ13214 749 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 BTBD16Q32M84 506 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PM20D1Q6GTS8 502 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 CCDC190Q86UF4 302 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 CDH24Q86UP0 819 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 FRS2Q8WU20 508 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 IPCEF1Q8WWN9 437 aaPredicted RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 TRNT1Q96Q11 434 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ATXN3LQ9H3M9 355 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GSTO2Q9H4Y5 243 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 NIPAL2Q9H841 368 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ATP6V1HQ9UI12 483 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 IRAK2O43187 625 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 EEDO75530 441 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 HGFP14210 728 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GZMKP49863 264 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 TAS2R39P59534 338 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ITKQ08881 620 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 TNK1Q13470 666 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GRB7Q14451 532 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 RBM20Q5T481 1227 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 SYVN1Q86TM6 617 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 AADATQ8N5Z0 425 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GALNT11Q8NCW6 608 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PYCR2Q96C36 320 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms