RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 NTHL1P78549 312 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 PRRT3Q5FWE3 981 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 OR4F3Q6IEY1 312 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 B3GNT6Q6ZMB0 384 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 GOLGA7Q7Z5G4 137 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 NXPE1Q8N323 547 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 OR51B5Q9H339 312 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 TTC34A8MYJ7 566 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 PGRMC2O15173 223 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 WDR4P57081 412 aaKnown RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF33AQ06730 810 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 GANABQ14697 944 aaKnown RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 IQCHQ86VS3 1027 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF641Q96N77 438 aaPredicted RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 ZNF570Q96NI8 536 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 SLC2A13Q96QE2 648 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 TUBGCP5Q96RT8 1024 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 SLC35A5Q9BS91 424 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 GPR174Q9BXC1 333 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 NLE1Q9NVX2 485 aaPredicted RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 PTX3P26022 381 aaPredicted RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 KCTD21Q4G0X4 260 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 CXorf57Q6NSI4 855 aaKnown RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 GHDCQ8N2G8 530 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 WDTC1Q8N5D0 677 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 UTS2RQ9UKP6 389 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
CLIP2-202ENST00000361545 OAS3Q9Y6K5 1087 aaKnown RBP18.13■□□□□ 0.49
CLIP2-202ENST00000361545 CAPGP40121 348 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 RPL5P46777 297 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 DHCR24Q15392 516 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 TSEN15Q8WW01 171 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 SLC25A36Q96CQ1 311 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 PLGRKTQ9HBL7 147 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 ABCB10Q9NRK6 738 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 CYTH4Q9UIA0 394 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 BACE2Q9Y5Z0 518 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 OAS1P00973 400 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 PTGES3Q15185 160 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 TAB1Q15750 504 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 C6orf52Q5T4I8 152 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 TMEM214Q6NUQ4 689 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 KIFC1Q9BW19 673 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 CLEC4MQ9H2X3 399 aaPredicted RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 IRGMA1A4Y4 181 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 ASNA1O43681 348 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 KHDRBS3O75525 346 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 ITGB1P05556 798 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 SCARB2Q14108 478 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 SGCBQ16585 318 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 SPIN4Q56A73 249 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 UBAP2Q5T6F2 1119 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 TMIGD1Q6UXZ0 262 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 NUP54Q7Z3B4 507 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 DCUN1D3Q8IWE4 304 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 AVL9Q8NBF6 648 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 COL21A1Q96P44 957 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 GPR22Q99680 433 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 OR51V1Q9H2C8 321 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 DNAJC25-GNG10A0A024R161 153 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 DUXAA6NLW8 204 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 OR1I1O60431 355 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 GPIP06744 558 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 C8orf89P0DMQ9 161 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 RPS9P46781 194 aaKnown RBP18.12■□□□□ 0.49
CLIP2-202ENST00000361545 DGKQP52824 942 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 FRRS1Q6ZNA5 592 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 XKR8Q9H6D3 395 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 ETAA1Q9NY74 926 aa18.12■□□□□ 0.49
CLIP2-202ENST00000361545 SLC7A1P30825 629 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 C1orf61Q13536 156 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 THAP5Q7Z6K1 395 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 ZC3H3Q8IXZ2 948 aaKnown RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 SLC5A11Q8WWX8 675 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 PLEKHG4BQ96PX9 1271 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 HAPLN2Q9GZV7 340 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 TMEM138Q9NPI0 162 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 SMPD3Q9NY59 655 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 SNPHO15079 494 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 SOCS5O75159 536 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 MEF2AQ02078 507 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 MZT2BQ6NZ67 158 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 TTC9BQ8N6N2 239 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 OR4C6Q8NH72 309 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 HM13Q8TCT9 377 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 IFT27Q9BW83 186 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 FAM192AQ9GZU8 254 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 TULP3O75386 442 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 CASRP41180 1078 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 RPS21P63220 83 aaKnown RBP18.11■□□□□ 0.49
CLIP2-202ENST00000361545 CLLU1OSQ5K130 101 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 FAM92BQ6ZTR7 304 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 AHSA2Q719I0 299 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 OR9A1PQ8NGU1 263 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 PSMA8Q8TAA3 256 aa18.11■□□□□ 0.49
CLIP2-202ENST00000361545 MCUBQ9NWR8 336 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms