RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 OR2A12Q8NGT7 310 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 APOLD1Q96LR9 279 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 GSNP06396 782 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 POLR2IP36954 125 aaKnown RBP21.5■■□□□ 1.03
UPF3A-201ENST00000351487 MAGEA2P43356 314 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 GPR107Q5VW38 600 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 NOXRED1Q6NXP6 359 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 SPESP1Q6UW49 350 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 ZNF555Q8NEP9 628 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 PYURFQ96I23 114 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 RNF208Q9H0X6 261 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 GPRC5BQ9NZH0 403 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 NFKBIL1Q9UBC1 381 aaPredicted RBP21.5■■□□□ 1.03
UPF3A-201ENST00000351487 PCDHGA8Q9Y5G5 932 aa21.5■■□□□ 1.03
UPF3A-201ENST00000351487 HEMK1Q9Y5R4 338 aaPredicted RBP21.5■■□□□ 1.03
UPF3A-201ENST00000351487 NEDD8-MDP1E9PL57 170 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 RFXANKO14593 260 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 B4GAT1O43505 415 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 PRMT3O60678 531 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 SLCO2B1O94956 709 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ATE1O95260 518 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 B3GALT4O96024 378 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 GSTM1P09488 218 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 CYP2A6P11509 494 aaPredicted RBP21.49■■□□□ 1.03
UPF3A-201ENST00000351487 PRPS1L1P21108 318 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ITPKAP23677 461 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 VIPR1P32241 457 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 PIGAP37287 484 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 CCR2P41597 374 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 KIR3DL1P43629 444 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 GSTM4Q03013 218 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 CSTF3Q12996 717 aaKnown RBP21.49■■□□□ 1.03
UPF3A-201ENST00000351487 CHIT1Q13231 466 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 NEDD8Q15843 81 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 PGS1Q32NB8 556 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 LRRC23Q53EV4 343 aaPredicted RBP21.49■■□□□ 1.03
UPF3A-201ENST00000351487 LIPJQ5W064 366 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 SERPINA11Q86U17 422 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 NELL1Q92832 810 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 EGLN2Q96KS0 407 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 FAM83DQ9H4H8 585 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 TMEM39AQ9NV64 488 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 C3orf18Q9UK00 162 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 PTPRSQ13332 1948 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 NOBOXO60393 691 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ABCB7O75027 752 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 MTX2O75431 263 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 HALP42357 657 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 TRPC1P48995 793 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 KCNAB2Q13303 367 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 DMC1Q14565 340 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 TMEM26Q6ZUK4 368 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ZNF551Q7Z340 670 aaPredicted RBP21.49■■□□□ 1.03
UPF3A-201ENST00000351487 HSD11B1LQ7Z5J1 315 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 CHPFQ8IZ52 775 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ZNF557Q8N988 423 aaPredicted RBP21.49■■□□□ 1.03
UPF3A-201ENST00000351487 KREMEN2Q8NCW0 462 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 DDHD1Q8NEL9 900 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ASZ1Q8WWH4 475 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 ELMO1Q92556 727 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 TBC1D20Q96BZ9 403 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 FAM83CQ9BQN1 747 aa21.49■■□□□ 1.03
UPF3A-201ENST00000351487 THG1LQ9NWX6 298 aaKnown RBP21.49■■□□□ 1.03
UPF3A-201ENST00000351487 CCNDBP1O95273 360 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 FTH1P02794 183 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 ADH1AP07327 375 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 CCL5P13501 91 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 EEF1B2P24534 225 aaKnown RBP21.48■■□□□ 1.03
UPF3A-201ENST00000351487 GABARAPL2P60520 117 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 CES5AQ6NT32 575 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 TMEM179BQ7Z7N9 219 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 ADIPOR2Q86V24 386 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 CHDHQ8NE62 594 aaPredicted RBP21.48■■□□□ 1.03
UPF3A-201ENST00000351487 B4GALNT2Q8NHY0 566 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 SCAMP4Q969E2 229 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 BBS2Q9BXC9 721 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 ATG10Q9H0Y0 220 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 CIDEBQ9UHD4 219 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 KRT87PA6NCN2 255 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 SEC14L2O76054 403 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 LRATO95237 230 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 MYCLP1P12525 358 aaPredicted RBP21.48■■□□□ 1.03
UPF3A-201ENST00000351487 VAC14Q08AM6 782 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 SLC14A1Q13336 389 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 TUBA3CQ13748 450 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 SKIV2LQ15477 1246 aaKnown RBP21.48■■□□□ 1.03
UPF3A-201ENST00000351487 RFX4Q33E94 735 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 XAF1Q6GPH4 301 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 OR4F3Q6IEY1 312 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 HIPK1Q86Z02 1210 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 PGBD3Q8N328 593 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 EZH1Q92800 747 aaPredicted RBP21.48■■□□□ 1.03
UPF3A-201ENST00000351487 YME1L1Q96TA2 773 aa21.48■■□□□ 1.03
UPF3A-201ENST00000351487 SAMD4AQ9UPU9 718 aaKnown RBP21.48■■□□□ 1.03
UPF3A-201ENST00000351487 MTCL1Q9Y4B5 1905 aaKnown RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 TSPAN11A1L157 253 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 CD22P20273 847 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 RECQLP46063 649 aaPredicted RBP21.47■■□□□ 1.03
UPF3A-201ENST00000351487 C21orf58P58505 322 aa21.47■■□□□ 1.03
UPF3A-201ENST00000351487 SRSF11Q05519 484 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms