RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SOX6P35712 828 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 AGTR2P50052 363 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 ARSDP51689 593 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 CD83Q01151 205 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 CYP4F3Q08477 520 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 PON2Q15165 354 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 ZC3H12BQ5HYM0 836 aaKnown RBP17.71■□□□□ 0.42
PKP3-201ENST00000331563 RANBP10Q6VN20 620 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 LRRC20Q8TCA0 184 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 TNIP3Q96KP6 325 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 COPS4Q9BT78 406 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 LYVE1Q9Y5Y7 322 aa17.71■□□□□ 0.42
PKP3-201ENST00000331563 RALGAPA2Q2PPJ7 1873 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 A0A096LPI6 279 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 ZNF780AO75290 641 aaPredicted RBP17.7■□□□□ 0.42
PKP3-201ENST00000331563 SLITRK5O94991 958 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 IFI30P13284 250 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 CBLP22681 906 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 CCNCP24863 283 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 C21orf33P30042 268 aaPredicted RBP17.7■□□□□ 0.42
PKP3-201ENST00000331563 SCAPQ12770 1279 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 MAD2L1BPQ15013 274 aaPredicted RBP17.7■□□□□ 0.42
PKP3-201ENST00000331563 TIGD5Q53EQ6 642 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 ZNF548Q8NEK5 533 aaPredicted RBP17.7■□□□□ 0.42
PKP3-201ENST00000331563 LHFPL5Q8TAF8 219 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 CD99L2Q8TCZ2 262 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 TSGA13Q96PP4 275 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 OR51E2Q9H255 320 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 GALPQ9UBC7 116 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 KLHL20Q9Y2M5 609 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 PDCD11Q14690 1871 aaKnown RBP17.7■□□□□ 0.42
PKP3-201ENST00000331563 CACNG3O60359 315 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 EPHA2P29317 976 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 PNPLA4P41247 253 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 CYP4F2P78329 520 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 IRF5Q13568 498 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 NR6A1Q15406 480 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 CLEC20AQ6ZU45 233 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 OR8J3Q8NGG0 315 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 CDK15Q96Q40 435 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 GRIP1Q9Y3R0 1128 aa17.7■□□□□ 0.42
PKP3-201ENST00000331563 MEIOCA2RUB1 952 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 LEUTXA8MZ59 168 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 BET1O15155 118 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 CAPN5O15484 640 aaPredicted RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 SP3Q02447 781 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 SLAMF1Q13291 335 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 GPR50Q13585 617 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 DDR2Q16832 855 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 CAPN13Q6MZZ7 669 aaPredicted RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 PHACTR4Q8IZ21 702 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 ATG16L2Q8NAA4 619 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 STAG3L4Q8TBR4 150 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 TMCO6Q96DC7 493 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 PCED1BQ96HM7 432 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 CCDC115Q96NT0 180 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 TRNT1Q96Q11 434 aaKnown RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 ATOH8Q96SQ7 321 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 LIN7BQ9HAP6 207 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 VNN3Q9NY84 501 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 COQ3Q9NZJ6 369 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 TEKT2Q9UIF3 430 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 FAM50BQ9Y247 325 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 POLR3HQ9Y535 204 aaPredicted RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 UBA6A0AVT1 1052 aaPredicted RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 ARVCFO00192 962 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 B3GALNT1O75752 331 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 OR4F21O95013 312 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 ZNF682O95780 498 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 IL7P13232 177 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 KEAP1Q14145 624 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 TSNQ15631 228 aaKnown RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 CCDC117Q8IWD4 279 aaPredicted RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 UBASH3BQ8TF42 649 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 IPCEF1Q8WWN9 437 aaPredicted RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 TNKS2Q9H2K2 1166 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 IKZF5Q9H5V7 419 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 ZFP14Q9HCL3 533 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 NUFIP1Q9UHK0 495 aaKnown RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 AGO1Q9UL18 857 aaKnown RBP17.69■□□□□ 0.42
PKP3-201ENST00000331563 A3GALT2U3KPV4 340 aa17.69■□□□□ 0.42
PKP3-201ENST00000331563 CREG1O75629 220 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 SCELO95171 688 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 SLC2A3P11169 496 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 AZGP1P25311 298 aaKnown RBP17.68■□□□□ 0.42
PKP3-201ENST00000331563 HNF4AP41235 474 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 DAPP51397 102 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 MGAT3Q09327 533 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 XKR7Q5GH72 579 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 ZDHHC21Q8IVQ6 265 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 SLC30A2Q9BRI3 323 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 BBS2Q9BXC9 721 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 NUSAP1Q9BXS6 441 aaKnown RBP17.68■□□□□ 0.42
PKP3-201ENST00000331563 PCDH10Q9P2E7 1040 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 KCTD3Q9Y597 815 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 CDH23Q9H251 3354 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 MIA3Q5JRA6 1907 aa17.68■□□□□ 0.42
PKP3-201ENST00000331563 H3BQ06 376 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms