RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RPS9P46781 194 aaKnown RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CLCNKAP51800 687 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF630Q2M218 657 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SLC8B1Q6J4K2 584 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 IKBIPQ70UQ0 350 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SPPL2CQ8IUH8 684 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SPATA9Q9BWV2 254 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SPRTNQ9H040 489 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 HDHD2Q9H0R4 259 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 PTGFRNQ9P2B2 879 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 MAP4K5Q9Y4K4 846 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SNAP47Q5SQN1 464 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CAND1Q86VP6 1230 aaKnown RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 ST13P5Q8NFI4 369 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 PIH1D2Q8WWB5 315 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 FCGR1BQ92637 280 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 YTHDF1Q9BYJ9 559 aaKnown RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SPATA2Q9UM82 520 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 PENKP01210 267 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 GJA1P17302 382 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 RPA4Q13156 261 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 FAM129CQ86XR2 697 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 EBF3Q9H4W6 596 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CD320Q9NPF0 282 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 MYH6P13533 1939 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 HEPACAM2A8MVW5 462 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 BCKDKO14874 412 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 TGM5O43548 720 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 ADAMTS4O75173 837 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 ALOX12P18054 663 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CASRP41180 1078 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CTSKP43235 329 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 RUNX3Q13761 415 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 HPS6Q86YV9 775 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 MCEMP1Q8IX19 187 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 FLRT1Q9NZU1 646 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 OR51F1A6NGY5 319 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 DRGXA6NNA5 263 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 AOC1P19801 751 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 ALAS2P22557 587 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 ROR2Q01974 943 aaKnown RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 TMEM115Q12893 351 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 KLHDC9Q8NEP7 349 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 MAPK15Q8TD08 544 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 IGSF8Q969P0 613 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 FKBP10Q96AY3 582 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CNPPD1Q9BV87 410 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SDHAF3Q9NRP4 125 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 CHD4Q14839 1912 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 CXorf49A8MYA2 514 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 LEFTY1O75610 366 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 KAT7O95251 611 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 SLC7A1P30825 629 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 HMGCLP35914 325 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 SLC13A2Q13183 592 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 GPRIN1Q7Z2K8 1008 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 ZMIZ2Q8NF64 920 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL42Q9P2K6 505 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 DMTF1Q9Y222 760 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 GPR89AB7ZAQ6 455 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 GPR89BP0CG08 455 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF37AP17032 561 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 DHPSP49366 369 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 NCBP2P52298 156 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 LBX1P52954 281 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 NDUFAF6Q330K2 333 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 CDH24Q86UP0 819 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 TMEM126BQ8IUX1 230 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 C5orf34Q96MH7 638 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 SMAD5Q99717 465 aaKnown RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 SLC2A6Q9UGQ3 507 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 CYTH4Q9UIA0 394 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 TOGARAM1Q9Y4F4 1720 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 C2orf74A8MZ97 194 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 DSTNP60981 165 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 TRIM32Q13049 653 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 RAB41Q5JT25 222 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF678Q5SXM1 525 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 MSANTD1Q6ZTZ1 278 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 IPCEF1Q8WWN9 437 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL31Q9H511 634 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 TAF4O00268 1085 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 BEST1O76090 585 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 KLF8O95600 359 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 HNF1BP35680 557 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 WDR5P61964 334 aaKnown RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 SLC7A9P82251 487 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 TCEAL5Q5H9L2 206 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 TMIGD1Q6UXZ0 262 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 PEG10Q86TG7 708 aaKnown RBP11.13□□□□□ -0.63
COL4A5-201ENST00000328300 ENKURQ8TC29 256 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 FOXJ1Q92949 421 aa11.13□□□□□ -0.63
COL4A5-201ENST00000328300 CLEC4MQ9H2X3 399 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms