RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ALG1LQ6GMV1 187 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CHPFQ8IZ52 775 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CLDN22Q8N7P3 220 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 COQ7Q99807 217 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 NT5DC2Q9H857 520 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 GPBP1L1Q9HC44 474 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TRIM39Q9HCM9 518 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FAM120CQ9NX05 1096 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 WWOXQ9NZC7 414 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF225Q9UK10 706 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 POLR1CO15160 346 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 RGS5O15539 181 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 PROM1O43490 865 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 BCKDHAP12694 445 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 CTPS1P17812 591 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 MYL9P24844 172 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 IDH2P48735 452 aaKnown RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 DAPP51397 102 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 SOX4Q06945 474 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 ST3GAL4Q11206 333 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 FAPQ12884 760 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 LAPTM5Q13571 262 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 PTGR1Q14914 329 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 GPAT3Q53EU6 434 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 TWF2Q6IBS0 349 aaKnown RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 C19orf48Q6RUI8 117 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 HSDL2Q6YN16 418 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 DNAJB7Q7Z6W7 309 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 CDH24Q86UP0 819 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 EFHBQ8N7U6 833 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 OR2T11Q8NH01 316 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 NTMT1Q9BV86 223 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 PNMA8BQ9ULN7 279 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 USP22Q9UPT9 525 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 KCTD3Q9Y597 815 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 MBLAC1A4D2B0 266 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 NPEPPSL1A6NEC2 478 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 SNTNA6NMZ2 147 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 MANBAO00462 879 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 DSCR3O14972 297 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 SEC14L5O43304 696 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 NOS1APO75052 506 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 TYMPP19971 482 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 RHAGQ02094 409 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 GTF2H2Q13888 395 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 ESCO2Q56NI9 601 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 GTF2H2CQ6P1K8 395 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 NELL1Q92832 810 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 DNASE1L2Q92874 299 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 AP2M1Q96CW1 435 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 MYO19Q96H55 970 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 HSH2DQ96JZ2 352 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 C16orf70Q9BSU1 422 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 TSEN34Q9BSV6 310 aaKnown RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 PAK6Q9NQU5 681 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 KLHL42Q9P2K6 505 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 KLHL20Q9Y2M5 609 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 SIPA1L1O43166 1804 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 NCF1BA6NI72 391 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 NCF1CA8MVU1 366 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 HHLA1C9JL84 531 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 KIAA0513O60268 411 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 ICMTO60725 284 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 PRAMEF11O60813 436 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 IL1AP01583 271 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 PGK2P07205 417 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 CYP4B1P13584 511 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 RPS3P23396 243 aaKnown RBP eCLIP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 AKAP5P24588 427 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 TNFSF8P32971 234 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 CA8P35219 290 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 OR3A3P47888 321 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 TBX4P57082 545 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 RBBP4Q09028 425 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 AAK1Q2M2I8 961 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 FAM209AQ5JX71 171 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 MEDAGQ5VYS4 303 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 METAP1DQ6UB28 335 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 LPCAT1Q8NF37 534 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 GGHQ92820 318 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 HYLS1Q96M11 299 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 KLHL5Q96PQ7 755 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 OSMRQ99650 979 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF717Q9BY31 904 aaPredicted RBP4.65□□□□□ -1.66
PTPN13-201ENST00000316707 MAGEH1Q9H213 219 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 FBXO44Q9H4M3 255 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 SMURF1Q9HCE7 757 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 ACOXLQ9NUZ1 547 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 CLN6Q9NWW5 311 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 TEKT2Q9UIF3 430 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 HS3ST4Q9Y661 456 aa4.65□□□□□ -1.66
PTPN13-201ENST00000316707 OR51F1A6NGY5 319 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 CCL22O00626 93 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GPR182O15218 404 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ORC5O43913 435 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 THP07101 528 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 PFKLP17858 780 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ITGB7P26010 798 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 HOXD11P31277 338 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GNASQ5JWF2 1037 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms