RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 CPSF4LA6NMK7 179 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 CASRP41180 1078 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 RAB25P57735 213 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 DSTNP60981 165 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PPP2R2BQ00005 443 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 SCARB2Q14108 478 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 C6orf52Q5T4I8 152 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 TMIGD1Q6UXZ0 262 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ZC3H3Q8IXZ2 948 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PQLC3Q8N755 202 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ZNF527Q8NB42 609 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 FAM110BQ8TC76 370 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 DENND1AQ8TEH3 1009 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 NARS2Q96I59 477 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 LRIG1Q96JA1 1093 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 IFT27Q9BW83 186 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ALKBH4Q9NXW9 302 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ING4Q9UNL4 249 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PDE10AQ9Y233 779 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PLOD3O60568 738 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 TRMUO75648 421 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 HMGN1P05114 100 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 CBX5P45973 191 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 CAMK1Q14012 370 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PTCHD3Q3KNS1 767 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 KCT2Q8NC54 265 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 FAM156AQ8NDB6 213 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ZNF296Q8WUU4 475 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 C7orf43Q8WVR3 580 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 C11orf24Q96F05 449 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 CGREF1Q99674 301 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 NDC1Q9BTX1 674 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PPM1HQ9ULR3 514 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ELOA3DA6NLF2 546 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 CDC7O00311 574 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 NDUFS4O43181 175 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 GRID2O43424 1007 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 AHCYP23526 432 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 SLC7A1P30825 629 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PPP3R1P63098 170 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 IRF5Q13568 498 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ELOA3BQ3SY89 546 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 CILP2Q8IUL8 1156 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 NXPE1Q8N323 547 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ELOA3Q8NG57 546 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 BORCS5Q969J3 196 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 DGAT2Q96PD7 388 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 SLC35A5Q9BS91 424 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 ETAA1Q9NY74 926 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 PCDHB11Q9Y5F2 797 aa11.68□□□□□ -0.54
AMBRA1-201ENST00000314845 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 KLF11O14901 512 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 COQ9O75208 318 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PSIP1O75475 530 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 POU2F1P14859 743 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 CCT3P49368 545 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 GMFBP60983 142 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 KLHL22Q53GT1 634 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 WDR45BQ5MNZ6 344 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 TMEM198Q66K66 360 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 CXorf57Q6NSI4 855 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 FBXO42Q6P3S6 717 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 GKN2Q86XP6 184 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 TRPV1Q8NER1 839 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 C10orf82Q8WW14 230 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 COMMD4Q9H0A8 199 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 OR51V1Q9H2C8 321 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 DNAJB4Q9UDY4 337 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 GMEB2Q9UKD1 530 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 DHRS7Q9Y394 339 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PCDHGB7Q9Y5F8 929 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 MYO9BQ13459 2157 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 A8MUI8 341 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PRODHO43272 600 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 COCHO43405 550 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 EBLN1P0CF75 366 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 MYCLP1P12525 358 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 RBM20Q5T481 1227 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 ADGRD2Q7Z7M1 963 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 KBTBD6Q86V97 674 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 DDX1Q92499 740 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PEX13Q92968 403 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 RAB7BQ96AH8 199 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PSKH2Q96QS6 385 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 OSBPL7Q9BZF2 842 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 KCNK6Q9Y257 313 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 CYB5AP00167 134 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 KLK1P06870 262 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 KLK3P07288 261 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 SMCO1Q147U7 214 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 CMTR2Q8IYT2 770 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 PJA1Q8NG27 643 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
AMBRA1-201ENST00000314845 NEUROD4Q9HD90 331 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms