RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 ITIH1P19827 911 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 SLC11A2P49281 568 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
CTTN-201ENST00000301843 USP39Q53GS9 565 aaKnown RBP13.19□□□□□ -0.3
CTTN-201ENST00000301843 ANGPTL8Q6UXH0 198 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
CTTN-201ENST00000301843 FUBP3Q96I24 572 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTTN-201ENST00000301843 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 MROQ9BYG7 248 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 IL26Q9NPH9 171 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
CTTN-201ENST00000301843 GAPDHSO14556 408 aaPredicted RBP13.18□□□□□ -0.3
CTTN-201ENST00000301843 PFDN6O15212 129 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 HPRP00739 348 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 NPPAP01160 153 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 EPB42P16452 691 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 C6orf183Q5T699 404 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 MFSD14CQ5VZR4 134 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 REXO5Q96IC2 774 aaKnown RBP13.18□□□□□ -0.3
CTTN-201ENST00000301843 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
CTTN-201ENST00000301843 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 ATAD3AQ9NVI7 634 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 DNMT3LQ9UJW3 386 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 HTR3EA5X5Y0 456 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 TBL1XO60907 577 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 COQ9O75208 318 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 SCELO95171 688 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 POU2F1P14859 743 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 KCNC4Q03721 635 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 CACNG1Q06432 222 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 DSC1Q08554 894 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 CXorf57Q6NSI4 855 aaKnown RBP13.18□□□□□ -0.3
CTTN-201ENST00000301843 HORMAD1Q86X24 394 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 SYTL1Q8IYJ3 562 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 SVOPLQ8N434 492 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 LGALS12Q96DT0 336 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 CCDC115Q96NT0 180 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 SLC22A12Q96S37 553 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 MTERF1Q99551 399 aaKnown RBP13.18□□□□□ -0.3
CTTN-201ENST00000301843 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
CTTN-201ENST00000301843 TNPO3Q9Y5L0 923 aaKnown RBP13.18□□□□□ -0.3
CTTN-201ENST00000301843 SEPT4O43236 478 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 PCDHGA12O60330 932 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CNOT3O75175 753 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 STC2O76061 302 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 GABARAPO95166 117 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 UGT2B4P06133 528 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ACPPP15309 386 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 SPNP16150 400 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 HOXA9P31269 272 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 LIPAP38571 399 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CLK1P49759 484 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 CDH4P55283 916 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 SLC35A2P78381 396 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 BOP1Q14137 746 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 SPATC1Q76KD6 591 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CACTIN-AS1Q8N1I8 211 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 SLC35B4Q969S0 331 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ZHX1-C8orf76Q96EF9 292 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 PANX1Q96RD7 426 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ASPSCR1Q9BZE9 553 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ELOVL6Q9H5J4 265 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 AASDHPPTQ9NRN7 309 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 KRT84Q9NSB2 600 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 TMEM184CQ9NVA4 438 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 SLC6A14Q9UN76 642 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CCDC88CQ9P219 2028 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 STK16O75716 305 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 DLGAP3O95886 979 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 IL6P05231 212 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ZNF7P17097 686 aaPredicted RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 SDC1P18827 310 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 EPORP19235 508 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 NR4A2P43354 598 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CRHR2Q13324 411 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 PLD1Q13393 1074 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 FAM26DQ5JW98 314 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 FAM180BQ6P0A1 224 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 APCDD1Q8J025 514 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 DNASE1L2Q92874 299 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ZNF641Q96N77 438 aaPredicted RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 TRIT1Q9H3H1 467 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 LINC00854A0A1B0GVQ3 168 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 YY2O15391 372 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ENGP17813 658 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 OR1E2P47887 323 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 IDH2P48735 452 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 RGS4P49798 205 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 NFATC2Q13469 925 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 KCNJ8Q15842 424 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms