RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 A0A096LPI6 279 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 TRIM64A6NGJ6 449 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 C16orf96A6NNT2 1141 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ARHGEF33A8MVX0 844 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 CFAP99D6REC4 459 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 RFXANKO14593 260 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 SCELO95171 688 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 CYP2A6P11509 494 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 PRPS2P11908 318 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 EEF1B2P24534 225 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 PBLDP30039 288 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ZBED5Q49AG3 693 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 XKR6Q5GH73 641 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 LRIF1Q5T3J3 769 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 C1orf53Q5VUE5 145 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ATG9BQ674R7 924 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ANKRD26P1Q6NSI1 321 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ELMSAN1Q6PJG2 1045 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 KCTD8Q6ZWB6 473 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 GALNT10Q86SR1 603 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 GPR180Q86V85 440 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 GALNT13Q8IUC8 556 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 FRS2Q8WU20 508 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ASZ1Q8WWH4 475 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 SDCCAG3Q96C92 435 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ISOC1Q96CN7 298 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 RMND5AQ9H871 391 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 E7EQ34 232 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 TMX2-CTNND1H3BSU7 103 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 CALRP27797 417 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 POLR2IP36954 125 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 GZMMP51124 257 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 VAC14Q08AM6 782 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 C11orf91Q3C1V1 193 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM259Q4ZIN3 620 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 GPR149Q86SP6 731 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 MRGPRX3Q96LB0 322 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 CRISPLD2Q9H0B8 497 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 ING2Q9H160 280 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 CXorf21Q9HAI6 301 aa17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 HELZP42694 1942 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-201ENST00000291842 PTPRSQ13332 1948 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 H0YAE9 185 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF30P17039 623 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 XPAP23025 273 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 PIGAP37287 484 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 BDKRB1P46663 353 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 SPIDRQ14159 915 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 GRIN2CQ14957 1233 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 CCNYL2Q5T2Q4 361 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 CES5AQ6NT32 575 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 CALHM3Q86XJ0 350 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 ERI1Q8IV48 349 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 PLPP6Q8IY26 295 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 GPR65Q8IYL9 337 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 RASGEF1AQ8N9B8 481 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 SGCDQ92629 289 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 DCUN1D5Q9BTE7 237 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 FAM220BPB1ANY3 271 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 WASH3PC4AMC7 463 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 PER2O15055 1255 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 ARHGEF15O94989 841 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 CDK4P11802 303 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 JUPP14923 745 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 IL7RP16871 459 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 MAP4P27816 1152 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 NRIP1P48552 1158 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 AP1S2P56377 157 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 SP140Q13342 867 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 NAE1Q13564 534 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 RAB39AQ14964 217 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 SYTL3Q4VX76 610 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 GPR107Q5VW38 600 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 THOC6Q86W42 341 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 SYT12Q8IV01 421 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 LEMD2Q8NC56 503 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 ADAMTS16Q8TE57 1224 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 C12orf43Q96C57 262 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 REXO4Q9GZR2 422 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 ADNPQ9H2P0 1102 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 MAN2B2Q9Y2E5 1009 aa17.81■□□□□ 0.44
SHKBP1-201ENST00000291842 E2F6O75461 281 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 SYN1P17600 705 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 PTPN2P17706 415 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 MAPK1P28482 360 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 KIR3DL1P43629 444 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 MAPK10P53779 464 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 HENMT1Q5T8I9 393 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 TTC23LQ6PF05 361 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 LMNTD1Q8N9Z9 388 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 PNPT1Q8TCS8 783 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 TESCQ96BS2 214 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 WRAP53Q9BUR4 548 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 OSBPL10Q9BXB5 764 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 OSBPL6Q9BZF3 934 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 AMBRA1Q9C0C7 1298 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 NAA50Q9GZZ1 169 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 ERVK-11Q9UQG0 969 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 CXorf51AA0A1B0GTR3 108 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms