RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 DDX28Q9NUL7 540 aaKnown RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 RHCGQ9UBD6 479 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 PCDHGA11Q9Y5H2 935 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 DYTNA2CJ06 578 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 FABP3P05413 133 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 C8AP07357 584 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 SMN1Q16637 294 aaKnown RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 HIST2H2ACQ16777 129 aaPredicted RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 HIST2H2AA3Q6FI13 130 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 RAET1GQ6H3X3 334 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ZNF773Q6PK81 442 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 CCDC103Q8IW40 242 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 PSD4Q8NDX1 1056 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ZNF583Q96ND8 569 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 CAPN10Q9HC96 672 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ITM2CQ9NQX7 267 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 SAMD4AQ9UPU9 718 aaKnown RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 COQ6Q9Y2Z9 468 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 LCTP09848 1927 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ELFN1P0C7U0 828 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 ETV3P41162 512 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 APOFQ13790 326 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 MED22Q15528 200 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 MPPE1Q53F39 396 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 SBSNQ6UWP8 590 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 HMGN2P46Q86SG4 172 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 TRIM73Q86UV7 250 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 HIPK1Q86Z02 1210 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 TERB1Q8NA31 727 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 CLSTN3Q9BQT9 956 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 GPATCH1Q9BRR8 931 aaKnown RBP15.47■□□□□ 0.07
SMAD6-201ENST00000288840 ZDHHC3Q9NYG2 299 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 KCNE2Q9Y6J6 123 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 UNCXA6NJT0 531 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 GGT1P19440 569 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 ACRV1P26436 265 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 PIGAP37287 484 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 RAPSNQ13702 412 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 TMEM220Q6QAJ8 160 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 OR5K1Q8NHB7 308 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 VANGL1Q8TAA9 524 aaPredicted RBP15.47■□□□□ 0.07
SMAD6-201ENST00000288840 GTF2H4Q92759 462 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 RHBDF1Q96CC6 855 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 AP2M1Q96CW1 435 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 OR51B5Q9H339 312 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 MAGEE1Q9HCI5 957 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 PARP14Q460N5 1801 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 ATP6V1G1O75348 118 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 PFKLP17858 780 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 CDH3P22223 829 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 CLCN7P51798 805 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 TIAL1Q01085 375 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMAD6-201ENST00000288840 DGUOKQ16854 277 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 CXorf57Q6NSI4 855 aaKnown RBP15.47■□□□□ 0.07
SMAD6-201ENST00000288840 DRAXINQ8NBI3 349 aaPredicted RBP15.47■□□□□ 0.07
SMAD6-201ENST00000288840 CLP1Q92989 425 aaKnown RBP15.47■□□□□ 0.07
SMAD6-201ENST00000288840 PYURFQ96I23 114 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 RPS6KA6Q9UK32 745 aa15.47■□□□□ 0.07
SMAD6-201ENST00000288840 ASPDHA6ND91 283 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 M0R129 80 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 AP1G1O43747 822 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 CAPN15O75808 1086 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 VIPP01282 170 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 GSTM1P09488 218 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 WASP42768 502 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 EPS8Q12929 822 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 TRAF3Q13114 568 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 INAQ16352 499 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 SLC15A4Q8N697 577 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 DCAF4L2Q8NA75 395 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 UBE2FQ969M7 185 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 FUNDC2Q9BWH2 189 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 SLC13A4Q9UKG4 626 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 PSME2Q9UL46 239 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 MED16Q9Y2X0 877 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 SLC10A3P09131 477 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 ATP6V1E1P36543 226 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 PCYT1AP49585 367 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 HLCSP50747 726 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 C2orf80Q0P641 193 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 NFATC3Q12968 1075 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 CSTF3Q12996 717 aaKnown RBP15.46■□□□□ 0.07
SMAD6-201ENST00000288840 PRR23BQ6ZRT6 265 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 ZNF605Q86T29 641 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 OR8H2Q8N162 312 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 TRIB3Q96RU7 358 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 CHCHD6Q9BRQ6 235 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 DUSP26Q9BV47 211 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 ACPTQ9BZG2 426 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 FZD4Q9ULV1 537 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 ASF1AQ9Y294 204 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 INSL5Q9Y5Q6 135 aa15.46■□□□□ 0.07
SMAD6-201ENST00000288840 ABCB7O75027 752 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 EBLN1P0CF75 366 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 FSHRP23945 695 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 CDKN2CP42773 168 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 CLCN4P51793 760 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 BMXP51813 675 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 ILF2Q12905 390 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms