RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SLC17A7Q9P2U7 560 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PTPRJQ12913 1337 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ATG12O94817 140 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 POU2F1P14859 743 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ARL14Q8N4G2 192 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SHKBP1Q8TBC3 707 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 GPR21Q99679 349 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TM9SF2Q99805 663 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DNAJB9Q9UBS3 223 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 BRWD1Q9NSI6 2320 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 GLDCP23378 1020 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ACTR1BP42025 376 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 LUMP51884 338 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SPIN4Q56A73 249 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 LRRN1Q6UXK5 716 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 BEND4Q6ZU67 534 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SLC13A3Q8WWT9 602 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TSNAXQ99598 290 aaKnown RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 IL12RB2Q99665 862 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 MYOCQ99972 504 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DENND2DQ9H6A0 471 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 P2RX2Q9UBL9 471 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 A0A1B0GVI7 797 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 KCNU1A8MYU2 1149 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 NARSO43776 548 aaKnown RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 COQ9O75208 318 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PKMP14618 531 aaKnown RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ADH6P28332 368 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DDR1Q08345 913 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 MTFR2Q6P444 385 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 OR6C6A6NF89 314 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 MPIP34949 423 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PIGZQ86VD9 579 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 NUDT13Q86X67 352 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PACRGLQ8N7B6 248 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 OR10A6Q8NH74 314 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 FCRL2Q96LA5 508 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PDCD2LQ9BRP1 358 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SLCO1B3Q9NPD5 702 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 MT-ND1P03886 318 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DSG2Q14126 1118 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TRAM1Q15629 374 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SLC29A4Q7RTT9 530 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 LAS2Q8IYD9 372 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF611Q8N823 705 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DCSTAMPQ9H295 470 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DEC1Q9P2X7 70 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 MRPS17Q9Y2R5 130 aaKnown RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 HLA-DPB1P04440 258 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 MSX2P35548 267 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 RPIAP49247 311 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PLGLB1Q02325 96 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 C2orf76Q3KRA6 126 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 CLEC12AQ5QGZ9 265 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TPRG1LQ5T0D9 272 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ARL9Q6T311 187 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 OR51D1Q8NGF3 324 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 OR56A1Q8NGH5 318 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 YTHDF1Q9BYJ9 559 aaKnown RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 KLRF1Q9NZS2 232 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 KIAA1210Q9ULL0 1709 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 NPHS1O60500 1241 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ERCC1P07992 297 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 DPEP1P16444 411 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 ERVK-21P61565 698 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CLCQ05315 142 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 NATD1Q8N6N6 113 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PRELID2Q8N945 189 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 STYXQ8WUJ0 223 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 TMED9Q9BVK6 235 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 SDHAF3Q9NRP4 125 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PLK2Q9NYY3 685 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 FAM149AA5PLN7 773 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RGL2O15211 777 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 HTR1AP08908 422 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CDH1P12830 882 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RAB4BP61018 213 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 MPP1Q00013 466 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CHIT1Q13231 466 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 CNPY1Q3B7I2 92 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 IFNL1Q8IU54 200 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 OR14C36Q8NHC7 312 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 HERVK_113Q902F9 699 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 SSX3Q99909 188 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 SLC35A5Q9BS91 424 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 LRRC3Q9BY71 257 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 GNG13Q9P2W3 67 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RABL2AQ9UBK7 228 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-201ENST00000282516 DKKL1Q9UK85 242 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 RABL2BQ9UNT1 228 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 SLC19A2O60779 497 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 KCNJ5P48544 419 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 FOXM1Q08050 763 aa8.54□□□□□ -1.04
NIPBL-201ENST00000282516 GRIK2Q13002 908 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms