RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 SLC13A3Q8WWT9 602 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 ZBTB18Q99592 522 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 MUC13Q9H3R2 512 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 BTN3A3O00478 584 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
HERC6-202ENST00000273960 GLP2RO95838 553 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 KRR1Q13601 381 aaKnown RBP12.51□□□□□ -0.41
HERC6-202ENST00000273960 EFR3AQ14156 821 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 ZNF792Q3KQV3 632 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 YIF1BQ5BJH7 314 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 TOR2AQ5JU69 321 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 LETMD1Q6P1Q0 360 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 SPATA19Q7Z5L4 167 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 ZNF548Q8NEK5 533 aaPredicted RBP12.51□□□□□ -0.41
HERC6-202ENST00000273960 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 CCM2Q9BSQ5 444 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 DPY30Q9C005 99 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 FBXW11Q9UKB1 542 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 TYW5A2RUC4 315 aaKnown RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 J3KR12 359 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 POLR1CO15160 346 aaPredicted RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 NCAM2O15394 837 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 POMCP01189 267 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 KRT6AP02538 564 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 KRT6BP04259 564 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ZXDBP98169 803 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 GPR50Q13585 617 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PWP1Q13610 501 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PTPRRQ15256 657 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 POU4F3Q15319 338 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 ANGPTL8Q6UXH0 198 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 TMPRSS11AQ6ZMR5 421 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PHC2Q8IXK0 858 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 SIDT2Q8NBJ9 832 aaKnown RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 PJA1Q8NG27 643 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ENKURQ8TC29 256 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 BHMTQ93088 406 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 MTERF3Q96E29 417 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 TSSK3Q96PN8 268 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 INPP5KQ9BT40 448 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 APOL5Q9BWW9 433 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ZC4H2Q9NQZ6 224 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 SLC25A37Q9NYZ2 338 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 RWDD3Q9Y3V2 267 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 SEC22BO75396 215 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 NPR3P17342 541 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 AKT1P31749 480 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 RYKP34925 604 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 SOX3P41225 446 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 UGT2B15P54855 530 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ERVPABLB-1P60509 514 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ABRAXAS2Q15018 415 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 CPZQ66K79 652 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 B3GNT4Q9C0J1 378 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 BPIFA1Q9NP55 256 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ATP13A2Q9NQ11 1180 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 TMEM30AQ9NV96 361 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 HCN4Q9Y3Q4 1203 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 NINQ8N4C6 2090 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 TEX46H3BTG2 121 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ANKRD28O15084 1053 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 CD3EAPO15446 510 aaKnown RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 NBNO60934 754 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 NIPSNAP2O75323 286 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 OR7A10O76100 309 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 RPS3P23396 243 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERC6-202ENST00000273960 SLC10A7Q0GE19 358 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ST3GAL4Q11206 333 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 CDH18Q13634 790 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 SPRYD7Q5W111 196 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PLEKHM3Q6ZWE6 761 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 PRSS48Q7RTY5 328 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 C1QTNF6Q9BXI9 259 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ACTL8Q9H568 366 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 ABI2Q9NYB9 513 aaPredicted RBP12.5□□□□□ -0.41
HERC6-202ENST00000273960 A0A0C4DFX4 3053 aa12.5□□□□□ -0.41
HERC6-202ENST00000273960 MIA3Q5JRA6 1907 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 SLITRK5O94991 958 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 CLCN7P51798 805 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 SMSP52788 366 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 TAC4Q86UU9 113 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 ENTHD1Q8IYW4 607 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 LIX1Q8N485 282 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 OR6C4Q8NGE1 309 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 STAG3L4Q8TBR4 150 aa12.49□□□□□ -0.41
HERC6-202ENST00000273960 SMAD5Q99717 465 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms