RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 HCFC1R1Q9NWW0 138 aa16.38■□□□□ 0.21
SSPN-201ENST00000242729 DNMT3BQ9UBC3 853 aaKnown RBP16.38■□□□□ 0.21
SSPN-201ENST00000242729 TMEFF2Q9UIK5 374 aaPredicted RBP16.38■□□□□ 0.21
SSPN-201ENST00000242729 A0A0C4DFX4 3053 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 RPS3P23396 243 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSPN-201ENST00000242729 GRAMD4Q6IC98 578 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 CRTC3Q6UUV7 619 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 EGFL6Q8IUX8 553 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 USP7Q93009 1102 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 PLEKHA8Q96JA3 519 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 AMBNQ9NP70 447 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 KCTD5Q9NXV2 234 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 BTBD3Q9Y2F9 522 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 SH3PXD2BA1X283 911 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 DYTNA2CJ06 578 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 SLC1A7O00341 560 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 BCKDKO14874 412 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 ENGP17813 658 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 MAD2L1Q13257 205 aaPredicted RBP16.37■□□□□ 0.21
SSPN-201ENST00000242729 TTC23Q5W5X9 447 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 Q6ZVL8 140 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 TMEM25Q86YD3 366 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 SYT12Q8IV01 421 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 ADHFE1Q8IWW8 467 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 ALDH16A1Q8IZ83 802 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 TMEM132CQ8N3T6 1108 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 OVCA2Q8WZ82 227 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 ELMO1Q92556 727 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 DEFB118Q96PH6 123 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 RBM4BQ9BQ04 359 aaKnown RBP16.37■□□□□ 0.21
SSPN-201ENST00000242729 RBM4Q9BWF3 364 aaKnown RBP16.37■□□□□ 0.21
SSPN-201ENST00000242729 BACE2Q9Y5Z0 518 aa16.37■□□□□ 0.21
SSPN-201ENST00000242729 ANAPC1Q9H1A4 1944 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 TRBV5-4A0A0C4DH59 114 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 PABPN1LA6NDY0 278 aaKnown RBP16.36■□□□□ 0.21
SSPN-201ENST00000242729 NEDD8-MDP1E9PL57 170 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 SAP18O00422 153 aaKnown RBP16.36■□□□□ 0.21
SSPN-201ENST00000242729 FPGTO14772 594 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 SOD2P04179 222 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 IGFBP5P24593 272 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 PDE12Q6L8Q7 609 aaKnown RBP16.36■□□□□ 0.21
SSPN-201ENST00000242729 GPR149Q86SP6 731 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 CYB5D2Q8WUJ1 264 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 SH3KBP1Q96B97 665 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 PYURFQ96I23 114 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 CORO1BQ9BR76 489 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 BRD9Q9H8M2 597 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 TRPS1Q9UHF7 1281 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 PNMA8BQ9ULN7 279 aaPredicted RBP16.36■□□□□ 0.21
SSPN-201ENST00000242729 C16orf96A6NNT2 1141 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 HOXA2O43364 376 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 SEC14L2O76054 403 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 CPNE6O95741 557 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 CD22P20273 847 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 AOAHP28039 575 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 ETV3P41162 512 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 ISL1P61371 349 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 PHEXP78562 749 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 DEFB103AP81534 67 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 VLDLRP98155 873 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 NR1D2Q14995 579 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 Q6ZNB5 142 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 VOPP1Q96AW1 172 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 CCDC115Q96NT0 180 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 NODALQ96S42 347 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 SUV39H2Q9H5I1 410 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 AASDHPPTQ9NRN7 309 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 ZDHHC3Q9NYG2 299 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 LSM7Q9UK45 103 aaKnown RBP16.36■□□□□ 0.21
SSPN-201ENST00000242729 SNX5Q9Y5X3 404 aa16.36■□□□□ 0.21
SSPN-201ENST00000242729 E7EQ34 232 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 BCAS1O75363 584 aaPredicted RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 SCELO95171 688 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 FADS2O95864 444 aaKnown RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 OPN1SWP03999 348 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 URODP06132 367 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 C1SP09871 688 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 PTPN6P29350 595 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 DGKEP52429 567 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 XKR6Q5GH73 641 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 NOXRED1Q6NXP6 359 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 DHRS4L2Q6PKH6 230 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 TMEM121BQ9BXQ6 578 aaPredicted RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 TBC1D23Q9NUY8 699 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 THG1LQ9NWX6 298 aaKnown RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 PDP1Q9P0J1 537 aaPredicted RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 TRBV5-3A0A0A0MS03 114 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 CLIC1O00299 241 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 LAMP1P11279 417 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 COX7A2P14406 83 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 RAD23AP54725 363 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 CLDN8P56748 225 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 IRF8Q02556 426 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 OCA2Q04671 838 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 PERM1Q5SV97 790 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
SSPN-201ENST00000242729 ZCCHC7Q8N3Z6 543 aaKnown RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 ZNF420Q8TAQ5 688 aaPredicted RBP16.35■□□□□ 0.21
SSPN-201ENST00000242729 MCOLN3Q8TDD5 553 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms