RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SLC14A1Q13336 389 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 CYLC2Q14093 348 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-201ENST00000238688 E2F2Q14209 437 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 PTK2BQ14289 1009 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 IRF4Q15306 451 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 SPATS1Q496A3 300 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 C16orf89Q6UX73 402 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 HACD2Q6Y1H2 254 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 TRIM46Q7Z4K8 759 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 DDIASQ8IXT1 998 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 RAB42Q8N4Z0 105 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 METTL6Q8TCB7 284 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 SCNM1Q9BWG6 230 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 RAB11FIP5Q9BXF6 653 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 PCBD2Q9H0N5 130 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 EHD1Q9H4M9 534 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 EFCAB1Q9HAE3 211 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 SDR39U1Q9NRG7 319 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-201ENST00000238688 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 ASIC5Q9NY37 505 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 POLG2Q9UHN1 485 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 PRPF19Q9UMS4 504 aaKnown RBP12.82□□□□□ -0.36
SLIRP-201ENST00000238688 DMTF1Q9Y222 760 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 SLC17A4Q9Y2C5 497 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 TDRD6O60522 2096 aaKnown RBP12.82□□□□□ -0.36
SLIRP-201ENST00000238688 ASPMQ8IZT6 3477 aa12.82□□□□□ -0.36
SLIRP-201ENST00000238688 PCM1Q15154 2024 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ARHGEF33A8MVX0 844 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 C1QTNF9BB2RNN3 333 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 K7ESM1 405 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 OR7A17O14581 309 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 PIP5K1BO14986 540 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 RGS14O43566 566 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 MGRN1O60291 552 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ULK1O75385 1050 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 C1QTNF9P0C862 333 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 PRPH2P23942 346 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 CCR5P51681 352 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 CLCNKAP51800 687 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 RAP1GDS1P52306 607 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ERVPABLB-1P60509 514 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 SIM1P81133 766 aaPredicted RBP12.81□□□□□ -0.36
SLIRP-201ENST00000238688 LRP8Q14114 963 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 UBAP2LQ14157 1087 aaKnown RBP12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ST3GAL2Q16842 350 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 KIF19Q2TAC6 998 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 HLA-BQ31612 363 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ATP6AP1LQ52LC2 224 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 WASHC2DQ5SRD0 308 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 C6orf163Q5TEZ5 329 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 METRNLQ641Q3 311 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 KIAA0895LQ68EN5 471 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 CLEC6AQ6EIG7 209 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 LAYNQ6UX15 382 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 C11orf96Q7Z7L8 435 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 VRK3Q8IV63 474 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ZNF547Q8IVP9 402 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 DCUN1D3Q8IWE4 304 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 MIER2Q8N344 545 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 OR4F6Q8NGB9 312 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 OR56A3Q8NH54 315 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 SETD7Q8WTS6 366 aaKnown RBP12.81□□□□□ -0.36
SLIRP-201ENST00000238688 GATA6Q92908 595 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 USP7Q93009 1102 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 RAD51AP1Q96B01 352 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 TUBGCP3Q96CW5 907 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 REPS1Q96D71 796 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 SERPINI1Q99574 410 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 MIPEPQ99797 713 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 SHCBP1LQ9BZQ2 653 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 BRINP2Q9C0B6 783 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 PITHD1Q9GZP4 211 aaPredicted RBP12.81□□□□□ -0.36
SLIRP-201ENST00000238688 OR52A5Q9H2C5 316 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 GAREM1Q9H706 876 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 TM9SF3Q9HD45 589 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 SLC40A1Q9NP59 571 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ZIM2Q9NZV7 527 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 SPATA7Q9P0W8 599 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 ZFR2Q9UPR6 939 aaKnown RBP12.81□□□□□ -0.36
SLIRP-201ENST00000238688 MAPRE3Q9UPY8 281 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 HS3ST3A1Q9Y663 406 aa12.81□□□□□ -0.36
SLIRP-201ENST00000238688 COPG1Q9Y678 874 aaKnown RBP12.81□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3DA0A087WVF3 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3IA0A087WXS9 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3EA0A087X179 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3KA0A087X1G2 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3FA6NER0 549 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 LRRC14BA6NHZ5 514 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D3LB9A6J9 549 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PSMD12O00232 456 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 PLK4O00444 970 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 FPGTO14772 594 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 GSC2O15499 205 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 LATO43561 262 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 HYAL3O43820 417 aaPredicted RBP12.8□□□□□ -0.36
SLIRP-201ENST00000238688 OR4F21O95013 312 aa12.8□□□□□ -0.36
SLIRP-201ENST00000238688 C1orf105O95561 183 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms