RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 WBP4O75554 376 aaKnown RBP19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 BCKDHAP12694 445 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 TNFRSF1BP20333 461 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 TACR1P25103 407 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 ARMCX4Q5H9R4 360 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 AGAP6Q5VW22 663 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 ZNF598Q86UK7 904 aaKnown RBP19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 GALNT12Q8IXK2 581 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 AGAP4Q96P64 663 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CLSTN3Q9BQT9 956 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 EBPLQ9BY08 206 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 NYNRINQ9P2P1 1898 aaKnown RBP19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 M0R082 166 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CBX4O00257 560 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 IL6P05231 212 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 ITGAMP11215 1152 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CTPS1P17812 591 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 SERINC3Q13530 473 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CAMK2GQ13555 558 aaPredicted RBP19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CYP27C1Q4G0S4 372 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 FZD9O00144 591 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 HAT1O14929 419 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CHRM5P08912 532 aaPredicted RBP19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 CXCR2P25025 360 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 HOXA9P31269 272 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 ENTHD1Q8IYW4 607 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 SPPL2AQ8TCT8 520 aa19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 NLE1Q9NVX2 485 aaPredicted RBP19.57■□□□□ 0.72
PPP1R3F-201ENST00000055335 DDNO94850 711 aaPredicted RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 PTTG1O95997 202 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 RPLP0P05388 317 aaKnown RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 RETP07949 1114 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 DNAJA1P31689 397 aaKnown RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 SLC19A1P41440 591 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 SLC15A1P46059 708 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 CRYBB1P53674 252 aaPredicted RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 IL10RBQ08334 325 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 KIAA0040Q15053 153 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 LACC1Q8IV20 430 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 RNF175Q8N4F7 328 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 HSH2DQ96JZ2 352 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 SPATA17Q96L03 361 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 TMEM248Q9NWD8 314 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 OGDHLQ9ULD0 1010 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 AREL1O15033 823 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 JUNDP17535 347 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 LPOP22079 712 aaPredicted RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 CAMK2BQ13554 666 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 UPP1Q16831 310 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 LINGO4Q6UY18 593 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 ZNF675Q8TD23 568 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 ZNF566Q969W8 418 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 M0QZ92 97 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 TTPAP49638 278 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 ACVR1Q04771 509 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 CAPN13Q6MZZ7 669 aaPredicted RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 PNCKQ6P2M8 343 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 SNX20Q7Z614 316 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 TSPYL5Q86VY4 417 aaPredicted RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 DEPDC4Q8N2C3 294 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 UBASH3BQ8TF42 649 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 BHMTQ93088 406 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 APOLD1Q96LR9 279 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 PANX1Q96RD7 426 aa19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 SAMD4AQ9UPU9 718 aaKnown RBP19.56■□□□□ 0.72
PPP1R3F-201ENST00000055335 OPN1SWP03999 348 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 DDX39BQ13838 428 aaKnown RBP19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 KDM4DQ6B0I6 523 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 FAM171BQ6P995 826 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 AGMOQ6ZNB7 445 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 DEFB132Q7Z7B7 95 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TTC9BQ8N6N2 239 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 ATAD1Q8NBU5 361 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 IL17RDQ8NFM7 739 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 SELENOMQ8WWX9 145 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TRNT1Q96Q11 434 aaKnown RBP19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 BCL7BQ9BQE9 202 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 MARCH2Q9P0N8 246 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 CXCL11O14625 94 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 POU1F1P28069 291 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 ZNF140P52738 457 aaPredicted RBP19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 RPS14P62263 151 aaKnown RBP19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TUBA1BP68363 451 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 SEMG2Q02383 582 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 SMARCB1Q12824 385 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TBRG1Q3YBR2 411 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 FAM151BQ6UXP7 276 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TUBA1AQ71U36 451 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 CHPFQ8IZ52 775 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 NECTIN4Q96NY8 510 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TINF2Q9BSI4 451 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 BOCQ9BWV1 1114 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 MMP28Q9H239 520 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 TIGARQ9NQ88 270 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 ELOVL2Q9NXB9 296 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 FAM8A1Q9UBU6 413 aa19.55■□□□□ 0.72
PPP1R3F-201ENST00000055335 CLDN24A6NM45 220 aa19.54■□□□□ 0.72
PPP1R3F-201ENST00000055335 PTHP01270 115 aa19.54■□□□□ 0.72
PPP1R3F-201ENST00000055335 FPR1P21462 350 aa19.54■□□□□ 0.72
PPP1R3F-201ENST00000055335 ACVR2AP27037 513 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms