RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 DPY19L3Q6ZPD9 716 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 CYP4Z1Q86W10 505 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 OR2AP1Q8NGE2 309 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 SDCCAG3Q96C92 435 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 COPS8Q99627 209 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 CCDC90BQ9GZT6 254 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 WARS2Q9UGM6 360 aaKnown RBP16.38■□□□□ 0.21
PHGDH-223ENST00000641597 TRPS1Q9UHF7 1281 aa16.38■□□□□ 0.21
PHGDH-223ENST00000641597 XIRP2A4UGR9 3374 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 FTH1P02794 183 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 BMXP51813 675 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 AQP6Q13520 282 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 GTF2H3Q13889 308 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 BTLAQ7Z6A9 289 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 UBE2FQ969M7 185 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 MTERF1Q99551 399 aaKnown RBP16.37■□□□□ 0.21
PHGDH-223ENST00000641597 SLC32A1Q9H598 525 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 OR2AG2A6NM03 316 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 TEX28O15482 410 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 HOXA2O43364 376 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 CD22P20273 847 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 MSH3P20585 1137 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 RAPSNQ13702 412 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 SPCS2Q15005 226 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 CCSMST1Q4G0I0 132 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 BROXQ5VW32 411 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 Q6ZVU0 165 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 GPR149Q86SP6 731 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 CLECL1Q8IZS7 167 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 C8orf4Q9NR00 106 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 OBSL1O75147 1896 aa16.37■□□□□ 0.21
PHGDH-223ENST00000641597 SEC14L2O76054 403 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 IGSF6O95976 241 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 C1SP09871 688 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 SERPINA4P29622 427 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 ALDH4A1P30038 563 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 FMO3P31513 532 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 NSG1P42857 185 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 EPHB3P54753 998 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 ISL1P61371 349 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 SMN1Q16637 294 aaKnown RBP16.36■□□□□ 0.21
PHGDH-223ENST00000641597 GRAMD4Q6IC98 578 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 PLPP6Q8IY26 295 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 MIPOL1Q8TD10 442 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 UBTD2Q8WUN7 234 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 SORCS1Q8WY21 1168 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 VWCEQ96DN2 955 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 TMEM169Q96HH4 297 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 PLGRKTQ9HBL7 147 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 BTBD3Q9Y2F9 522 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 KCNE1BA0A087WTH5 132 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 LOC100130705A0A1B0GUX0 176 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 MYO1GB0I1T2 1018 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 ABCB7O75027 752 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 KRT6AP02538 564 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 KRT6BP04259 564 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 AOAHP28039 575 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 HTR1BP28222 390 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 NRIP1P48552 1158 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 KRT6CP48668 564 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 GTF2IRD2BQ6EKJ0 949 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 ZCCHC8Q6NZY4 707 aaKnown RBP16.36■□□□□ 0.21
PHGDH-223ENST00000641597 PRR23BQ6ZRT6 265 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 GTF2IRD2Q86UP8 949 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 CALHM3Q86XJ0 350 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 DCP2Q8IU60 420 aaKnown RBP16.36■□□□□ 0.21
PHGDH-223ENST00000641597 KCTD5Q9NXV2 234 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 B4GALT6Q9UBX8 382 aa16.36■□□□□ 0.21
PHGDH-223ENST00000641597 ZNF701M0R085 212 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 INHBBP09529 407 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 NUDT7P0C024 238 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 CCNA2P20248 432 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 HALP42357 657 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 CLDN8P56748 225 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 LSM3P62310 102 aaKnown RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 CBX2Q14781 532 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 GALNT18Q6P9A2 607 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 SNX29P2Q8IUI4 249 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 SLC15A4Q8N697 577 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 ZNF420Q8TAQ5 688 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 SCRN2Q96FV2 425 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 FUNDC2Q9BWH2 189 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 PRDM8Q9NQV8 689 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 TMEM45AQ9NWC5 275 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 ZDHHC3Q9NYG2 299 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 MICAL3Q7RTP6 2002 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 COL4A6Q14031 1691 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 SH3PXD2BA1X283 911 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 RFXANKO14593 260 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 TOR1BO14657 336 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 ALDH1A1P00352 501 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 HOXB9P17482 250 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 AQP1P29972 269 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 GSSP48637 474 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 DEFB103AP81534 67 aa16.35■□□□□ 0.21
PHGDH-223ENST00000641597 MAD2L1Q13257 205 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-223ENST00000641597 CYP2U1Q7Z449 544 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms