RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 OGDHQ02218 1023 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 GPR17Q13304 367 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 ZNF273Q14593 569 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 FBXO43Q4G163 708 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 PGBD2Q6P3X8 592 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 MAMSTRQ6ZN01 415 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 DENND6AQ8IWF6 608 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 TCTE3Q8IZS6 198 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 SMG7Q92540 1137 aaKnown RBP7.24□□□□□ -1.25
PDE6A-205ENST00000617647 CLSTN3Q9BQT9 956 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 MXRA8Q9BRK3 442 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 ALG9Q9H6U8 611 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 CD300AQ9UGN4 299 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 FZD1Q9UP38 647 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 ERVK-19Q9WJR5 959 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 PCDHB14Q9Y5E9 798 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 GJA3Q9Y6H8 435 aa7.24□□□□□ -1.25
PDE6A-205ENST00000617647 SPATA31A6Q5VVP1 1343 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MYH9P35579 1960 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 B4DXG7 233 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 E9PI62 339 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 G3V2L1 256 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 KPNA3O00505 521 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MID1O15344 667 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 OIP5O43482 229 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 GRIN3BO60391 1043 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TRIM3O75382 744 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 KHDRBS3O75525 346 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 PAPSS2O95340 614 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 STAU1O95793 577 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TPSB2P20231 275 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 RORAP35398 523 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TGFBR2P37173 567 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MC2RQ01718 297 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 CTBP1Q13363 440 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MFSD13AQ14CX5 517 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 VEPH1Q14D04 833 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TPSAB1Q15661 275 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ZNF124Q15973 351 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 SEZ6Q53EL9 994 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NIPA1Q7RTP0 329 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 B3GNT8Q7Z7M8 397 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 DCP1BQ8IZD4 617 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 CYP4Z2PQ8N1L4 340 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 SYNPOQ8N3V7 929 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 OR10A6Q8NH74 314 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TMEM203Q969S6 136 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MYOCQ99972 504 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 DPYSL5Q9BPU6 564 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 LRRC3Q9BY71 257 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ZNF518BQ9C0D4 1074 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 AKTIPQ9H8T0 292 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 FOLH1BQ9HBA9 442 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NRBP2Q9NSY0 501 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ZNF639Q9UID6 485 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TSR3Q9UJK0 312 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 A0A1B0GVM2 712 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NCF1BA6NI72 391 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NCF1CA8MVU1 366 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ZNF487B1APH4 448 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ST8SIA5O15466 376 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NPHS1O60500 1241 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 SERPINF2P08697 491 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ACSM4P0C7M7 580 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NCF1P14598 390 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 LHCGRP22888 699 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 LIPAP38571 399 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 POLR2JP52435 117 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ARFIP1P53367 373 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 OR4D2P58180 307 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 VSX2P58304 361 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 STX4Q12846 297 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 CHAF1BQ13112 559 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 HNRNPA0Q13151 305 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 PRKG2Q13237 762 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 TRIM28Q13263 835 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MXD4Q14582 209 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ZNF667Q5HYK9 610 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 SYT6Q5T7P8 510 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 PMF1Q6P1K2 205 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 KIAA1324Q6UXG2 1013 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 NIM1KQ8IY84 436 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 GPR65Q8IYL9 337 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 C7orf31Q8N865 590 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 PPHLN1Q8NEY8 458 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 OR2T35Q8NGX2 323 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 GANCQ8TET4 914 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 C11orf24Q96F05 449 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 CDCA5Q96FF9 252 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 BTN2A3PQ96KV6 586 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 C10orf90Q96M02 699 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 FSD1LQ9BXM9 530 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 SIK2Q9H0K1 926 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ABCG4Q9H172 646 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 PIGUQ9H490 435 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 VAV3Q9UKW4 847 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 ATXN7L1Q9ULK2 861 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 GSTK1Q9Y2Q3 226 aa7.23□□□□□ -1.25
PDE6A-205ENST00000617647 MRPL11Q9Y3B7 192 aaKnown RBP7.23□□□□□ -1.25
PDE6A-205ENST00000617647 HSPE1-MOB4S4R3N1 261 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms