RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SATB2Q9UPW6 733 aa21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 MAGED1Q9Y5V3 778 aaPredicted RBP21.43■■□□□ 1.02
POLR2J3-220ENST00000613744 C9JVG2 144 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 ARNTLO00327 626 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 TBX1O43435 398 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 CST1P01037 141 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 APOA1P02647 267 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 POU2F2P09086 479 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 TSPAN8P19075 237 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 CES1P23141 567 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 FSHRP23945 695 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 CCNCP24863 283 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 CD6P30203 668 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 ATP5C1P36542 298 aaKnown RBP21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 SIGIRRQ6IA17 410 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 OTOP3Q7RTS5 596 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 CCDC103Q8IW40 242 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 IL17RDQ8NFM7 739 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 SERPINB11Q96P15 392 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 UBE2ZQ9H832 354 aaPredicted RBP21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 GKN1Q9NS71 199 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 QPCTLQ9NXS2 382 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 MARCH2Q9P0N8 246 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 N6AMT1Q9Y5N5 214 aa21.42■■□□□ 1.02
POLR2J3-220ENST00000613744 SCAMP3O14828 347 aaKnown RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 BCKDKO14874 412 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 MOCS2O96007 188 aaPredicted RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 IGLV3-25P01717 112 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 PRKCAP17252 672 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 MZF1P28698 734 aaPredicted RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 CDK10Q15131 360 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 PTGR2Q8N8N7 351 aaPredicted RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 SMRP1Q8NCR6 262 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 OR8J3Q8NGG0 315 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 OR6F1Q8NGZ6 308 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 GRPEL2Q8TAA5 225 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 RHEBL1Q8TAI7 183 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 GLOD4Q9HC38 313 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 INTS7Q9NVH2 962 aaKnown RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 ERVK-18Q9QC07 812 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 CD207Q9UJ71 328 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 DENND4CQ5VZ89 1909 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 SLC12A8A0AV02 714 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 I6L893 689 aaPredicted RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 ZNF197O14709 1029 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 PAPLNO95428 1278 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 CKMP06732 381 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 CXCR3P49682 368 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 DIO3P55073 304 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 CDH13P55290 713 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 LSM3P62310 102 aaKnown RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 C19orf57Q0VDD7 668 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 CCBE1Q6UXH8 406 aaPredicted RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 HIPK1Q86Z02 1210 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 IPMKQ8NFU5 416 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 SLA2Q9H6Q3 261 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 MAGIXQ9H6Y5 334 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 OLA1Q9NTK5 396 aaKnown RBP21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 DNMT3LQ9UJW3 386 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 GRIP1Q9Y3R0 1128 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 SNX10Q9Y5X0 201 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 PTGDR2Q9Y5Y4 395 aa21.41■■□□□ 1.02
POLR2J3-220ENST00000613744 MYLKQ15746 1914 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 EFCAB9A8MZ26 197 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 PRMT5O14744 637 aaPredicted RBP21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 PAPSS2O95340 614 aaPredicted RBP21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 FGF19O95750 216 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 LINC00032P0C843 101 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 IRF1P10914 325 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 PSMB9P28065 219 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 ALDH4A1P30038 563 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 FOXA1P55317 472 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 ZXDBP98169 803 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 LCP2Q13094 533 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 KEAP1Q14145 624 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 ARHGAP15Q53QZ3 475 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 ERAP2Q6P179 960 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 MSANTD2Q6P1R3 559 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 ZFAND4Q86XD8 727 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 FCGR1BQ92637 280 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 DCSTAMPQ9H295 470 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 PRDM6Q9NQX0 595 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 USP22Q9UPT9 525 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 SHROOM3Q8TF72 1996 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 GNGT2O14610 69 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 SPNP16150 400 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 CCR1P32246 355 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 KCNC1P48547 511 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 PLA2G4EQ3MJ16 856 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 XKR7Q5GH72 579 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 METTL4Q8N3J2 472 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 FGF13Q92913 245 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 SH3GL1Q99961 368 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 POPDC3Q9HBV1 291 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 CCL26Q9Y258 94 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 PCDHGA3Q9Y5H0 932 aa21.4■■□□□ 1.02
POLR2J3-220ENST00000613744 SLC7A4O43246 635 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 RGS10O43665 173 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 HS6ST1O60243 411 aa21.39■■□□□ 1.01
POLR2J3-220ENST00000613744 NOBOXO60393 691 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms