RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	GPR62	Q9BZJ7	368 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	OR51B5	Q9H339	312 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	ERVK-18	Q9QC07	812 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	ADAMTS5	Q9UNA0	930 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	PRAMEF11	O60813	436 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	SERPINB7	O75635	380 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	PREP	P48147	710 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	ARL4D	P49703	201 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	SLC13A2	Q13183	592 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	RFTN2	Q52LD8	501 aa	Predicted RBP	13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	FAM219B	Q5XKK7	198 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	CDC73	Q6P1J9	531 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	ZNF773	Q6PK81	442 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	BLOC1S3	Q6QNY0	202 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	SNX20	Q7Z614	316 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	C17orf64	Q86WR6	236 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	OOSP2	Q86WS3	158 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	CHPF	Q8IZ52	775 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.53	□□□□□ -0.24
MUC1-223	ENST00000611571		Q96MT0	163 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	MEAF6	Q9HAF1	191 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571	RPS6KB2	Q9UBS0	482 aa		13.53	□□□□□ -0.24
MUC1-223	ENST00000611571		A0A1B0GTW7	788 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	ZNF487	B1APH4	448 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	ERN1	O75460	977 aa	Known RBP	13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	UGT2B17	O75795	530 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	RXRG	P48443	463 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	TUBA4A	P68366	448 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	FAM124A	Q86V42	546 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	PARG	Q86W56	976 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	NAA50	Q9GZZ1	169 aa	Known RBP	13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	IGSF5	Q9NSI5	407 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	VPS29	Q9UBQ0	182 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	ITM2B	Q9Y287	266 aa		13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	GPC6	Q9Y625	555 aa	Predicted RBP	13.52	□□□□□ -0.24
MUC1-223	ENST00000611571	PLOD2	O00469	737 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ABCB7	O75027	752 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	VIP	P01282	170 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	PRG2	P13727	222 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	MAPK12	P53778	367 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	AP1S1	P61966	158 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	CRHR2	Q13324	411 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	IL18	Q14116	193 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	PLPP4	Q5VZY2	271 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	SUSD1	Q6UWL2	747 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	NEK10	Q6ZWH5	1172 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	CDH24	Q86UP0	819 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	SLC9A6	Q92581	669 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	BOC	Q9BWV1	1114 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	TPT1P8	Q9HAU6	139 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	SPO11	Q9Y5K1	396 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	INMT	O95050	263 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	NUDT14	O95848	222 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ENO2	P09104	434 aa	Predicted RBP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ALOX5	P09917	674 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	GTF2E2	P29084	291 aa	Known RBP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	SLC5A2	P31639	672 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ITGA1	P56199	1179 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	TAS2R41	P59536	307 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	PCDH1	Q08174	1060 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ZNF648	Q5T619	568 aa	Predicted RBP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	LYPLAL1	Q5VWZ2	237 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ERICH5	Q6P6B1	374 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	VTCN1	Q7Z7D3	282 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	OR10G6	Q8NH81	332 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	CYB5D2	Q8WUJ1	264 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	HSH2D	Q96JZ2	352 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	FERD3L	Q96RJ6	166 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	BARD1	Q99728	777 aa	Known RBP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	ZNF696	Q9H7X3	374 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	FARSB	Q9NSD9	589 aa	Known RBP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	THUMPD1	Q9NXG2	353 aa	Known RBP	13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	MAT2B	Q9NZL9	334 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	UBR2	Q8IWV8	1755 aa		13.52	□□□□□ -0.25
MUC1-223	ENST00000611571	MANBA	O00462	879 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	ATG13	O75143	517 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	SLC35G4	P0C7Q5	338 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	OLR1	P78380	273 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	ZXDB	P98169	803 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	DCST1	Q5T197	706 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	PGM2L1	Q6PCE3	622 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571		Q6ZVL8	140 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	FAM20C	Q8IXL6	584 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	CXorf40A	Q8TE69	158 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	VMP1	Q96GC9	406 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	TBX5	Q99593	518 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	TMEM106C	Q9BVX2	250 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	OR2AG1	Q9H205	316 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	GSTO2	Q9H4Y5	243 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	SPACA6	W5XKT8	324 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	SLC35F4	A4IF30	521 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	ADAMDEC1	O15204	470 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	PCDH7	O60245	1069 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	BMP10	O95393	424 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	CSF2	P04141	144 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	CCNYL3	P0C7X3	344 aa		13.51	□□□□□ -0.25
MUC1-223	ENST00000611571	CDK4	P11802	303 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms