RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ARL4DP49703 201 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 SP140Q13342 867 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 USP10Q14694 798 aaKnown RBP19.49■□□□□ 0.71
DDX39A-207ENST00000588542 ZKSCAN8Q15776 578 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-207ENST00000588542 ZIC1Q15915 447 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 PHKG1Q16816 387 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 CEACAM20Q6UY09 585 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 LRRC56Q8IYG6 542 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-207ENST00000588542 NKAPQ8N5F7 415 aaKnown RBP19.49■□□□□ 0.71
DDX39A-207ENST00000588542 SLC22A18Q96BI1 424 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 MRRFQ96E11 262 aaKnown RBP19.49■□□□□ 0.71
DDX39A-207ENST00000588542 ASPSCR1Q9BZE9 553 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 SPRY4Q9C004 299 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 PARVBQ9HBI1 364 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 SYTL2Q9HCH5 934 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 GPAMQ9HCL2 828 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 SOHLH2Q9NX45 425 aa19.49■□□□□ 0.71
DDX39A-207ENST00000588542 HMX2A2RU54 273 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 PHGDHO43175 533 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 SLU7O95391 586 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 SYF2O95926 243 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 FGF5P12034 268 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 CYP2A7P20853 494 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 IMPA1P29218 277 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 OAS2P29728 719 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 PNLIPRP1P54315 467 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 SLC12A2P55011 1212 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 IL11RAQ14626 422 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 GPR19Q15760 415 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 ZFAND4Q86XD8 727 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 C19orf47Q8N9M1 422 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 PPFIBP2Q8ND30 876 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 ZNF248Q8NDW4 579 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 OR2A1Q8NGT9 310 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 UHMK1Q8TAS1 419 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 MCOLN3Q8TDD5 553 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 ZNF501Q96CX3 271 aaPredicted RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 TSPAN17Q96FV3 270 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 TEFMQ96QE5 360 aaKnown RBP19.48■□□□□ 0.71
DDX39A-207ENST00000588542 ZPBPQ9BS86 351 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 FAM60AQ9NP50 221 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 PDE7BQ9NP56 450 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 FGF21Q9NSA1 209 aa19.48■□□□□ 0.71
DDX39A-207ENST00000588542 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-207ENST00000588542 E7ENX8 843 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 STMN1P16949 149 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 CD82P27701 267 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 HSD17B2P37059 387 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 ACY1Q03154 408 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 TAP2Q03519 686 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 TUBB3Q13509 450 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 SF1Q15637 639 aaKnown RBP19.47■□□□□ 0.71
DDX39A-207ENST00000588542 KIAA1614Q5VZ46 1190 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 SUSD1Q6UWL2 747 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 SBSNQ6UWP8 590 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 MBOAT1Q6ZNC8 495 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 CDHR3Q6ZTQ4 885 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 TRMT10CQ7L0Y3 403 aaKnown RBP19.47■□□□□ 0.71
DDX39A-207ENST00000588542 SLC44A1Q8WWI5 657 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 SMPDL3AQ92484 453 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 ANKRD7Q92527 254 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 NAF1Q96HR8 494 aaKnown RBP19.47■□□□□ 0.71
DDX39A-207ENST00000588542 CHRNA10Q9GZZ6 450 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 EPB41L4BQ9H329 900 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 STOX2Q9P2F5 926 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-207ENST00000588542 KLHL20Q9Y2M5 609 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 PCDHB11Q9Y5F2 797 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 PKD1L2Q7Z442 2459 aa19.47■□□□□ 0.71
DDX39A-207ENST00000588542 MDC1Q14676 2089 aaKnown RBP19.47■□□□□ 0.71
DDX39A-207ENST00000588542 A0A087WUV0 522 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-207ENST00000588542 A0A087WV48 116 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 CDC7O00311 574 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 RIPK2O43353 540 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 TIAF1O95411 115 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 ABHD2P08910 425 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 MSL3P1P0C860 447 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 MAGP20916 626 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 GMPRP36959 345 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 GABRA4P48169 554 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 CSRP3P50461 194 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 PMS2P54278 862 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 RAB10P61026 200 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 YBX1P67809 324 aaKnown RBP19.46■□□□□ 0.71
DDX39A-207ENST00000588542 TUBB4BP68371 445 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 BMPR2Q13873 1038 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 PPP1R3AQ16821 1122 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 TMTC4Q5T4D3 741 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 CMC1Q7Z7K0 106 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 DTX1Q86Y01 620 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 TCTN2Q96GX1 697 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 CCDC138Q96M89 665 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 DCBLD2Q96PD2 775 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 MIPEPQ99797 713 aa19.46■□□□□ 0.71
DDX39A-207ENST00000588542 NPEPPSL1A6NEC2 478 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 ZNF839A8K0R7 811 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 HCRTR1O43613 425 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 FKBP9O95302 570 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 CCDC166P0CW27 439 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 ZNF28P17035 718 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 CLN3Q13286 438 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms