RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 TMEM26Q6ZUK4 368 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 RPS27LQ71UM5 84 aaKnown RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 ARL14Q8N4G2 192 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 ARL10Q8N8L6 244 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 OR4C6Q8NH72 309 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 PPP4R1Q8TF05 950 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 SMPDL3AQ92484 453 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 OR4K3Q96R72 315 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 DUSP23Q9BVJ7 150 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 ZNF395Q9H8N7 513 aaPredicted RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 CCDC177Q9NQR7 707 aaPredicted RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 ACSS2Q9NR19 701 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 DNAJC11Q9NVH1 559 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 INTS7Q9NVH2 962 aaKnown RBP15.63■□□□□ 0.09
SS18-226ENST00000585241 GPRC5BQ9NZH0 403 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 OR6C2Q9NZP2 312 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 RAP2CQ9Y3L5 183 aa15.63■□□□□ 0.09
SS18-226ENST00000585241 GMNCA6NCL1 334 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 LILRA5A6NI73 299 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 UBFD1O14562 309 aaKnown RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 PRICKLE3O43900 615 aaPredicted RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 KATNA1O75449 491 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 WDR47O94967 919 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 EPB42P16452 691 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 ENGP17813 658 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 NBL1P41271 181 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 MAZP56270 477 aaKnown RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 CDC16Q13042 620 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 TRAF3Q13114 568 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 PRKAA1Q13131 559 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 LCTLQ6UWM7 567 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 THOC6Q86W42 341 aaKnown RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 LRRC34Q8IZ02 419 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 KIRREL3Q8IZU9 778 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 TEX9Q8N6V9 391 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 KYQ8NBH2 561 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 PPFIBP2Q8ND30 876 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 TRPC4APQ8TEL6 797 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 AGAP11Q8TF27 550 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 SETD7Q8WTS6 366 aaKnown RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 SH3KBP1Q96B97 665 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 PYCR2Q96C36 320 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 NRTNQ99748 197 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 MIPEPQ99797 713 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 NTMT1Q9BV86 223 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 PCBD2Q9H0N5 130 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 STN1Q9H668 368 aaKnown RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 EML4Q9HC35 981 aaKnown RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 SEMA4BQ9NPR2 832 aaPredicted RBP15.62■□□□□ 0.09
SS18-226ENST00000585241 PSD3Q9NYI0 1048 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 SLC22A14Q9Y267 594 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 PCDHGB2Q9Y5G2 931 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 ADAMTS9Q9P2N4 1935 aa15.62■□□□□ 0.09
SS18-226ENST00000585241 OR7A17O14581 309 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 TGDSO95455 350 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 HSPA4LO95757 839 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 VIMP08670 466 aaKnown RBP15.61■□□□□ 0.09
SS18-226ENST00000585241 ZNF806P0C7X5 589 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 ALPPL2P10696 532 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 PKNOX1P55347 436 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 TCEAL6Q6IPX3 200 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 ZCCHC8Q6NZY4 707 aaKnown RBP15.61■□□□□ 0.09
SS18-226ENST00000585241 FAM47EQ6ZV65 393 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 ZNF438Q7Z4V0 828 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 CUZD1Q86UP6 607 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 AMIGO1Q86WK6 493 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 SLC35F3Q8IY50 421 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 FAM181AQ8N9Y4 354 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 LCN9Q8WX39 176 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 TCEAL3Q969E4 200 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 GRAMD1AQ96CP6 724 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 HAUS8Q9BT25 410 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 ILKAPQ9H0C8 392 aaPredicted RBP15.61■□□□□ 0.09
SS18-226ENST00000585241 EPN3Q9H201 632 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 SMOC1Q9H4F8 434 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 XKR8Q9H6D3 395 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 NOL11Q9H8H0 719 aaKnown RBP15.61■□□□□ 0.09
SS18-226ENST00000585241 IPPKQ9H8X2 491 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 FGFR1OP2Q9NVK5 253 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 DNAAF2Q9NVR5 837 aaKnown RBP15.61■□□□□ 0.09
SS18-226ENST00000585241 ZNF225Q9UK10 706 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 GMEB2Q9UKD1 530 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 ANGPTL3Q9Y5C1 460 aa15.61■□□□□ 0.09
SS18-226ENST00000585241 LNP1A1A4G5 178 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 PPP6CO00743 305 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 PPM1DO15297 605 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 NUDT21O43809 227 aaKnown RBP15.6■□□□□ 0.09
SS18-226ENST00000585241 UGDHO60701 494 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 LRP3O75074 770 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 ESRRBO95718 433 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 OTCP00480 354 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 FGF4P08620 206 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 NPPBP16860 134 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 TSPAN8P19075 237 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 DRD4P21917 467 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 PEBP1P30086 187 aaKnown RBP15.6■□□□□ 0.09
SS18-226ENST00000585241 SEC24CP53992 1094 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 SH3BP2P78314 561 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 NR1D2Q14995 579 aa15.6■□□□□ 0.09
SS18-226ENST00000585241 CCDC6Q16204 474 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms