RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 PYGO1Q9Y3Y4 419 aa4.05□□□□□ -1.76
SMCHD1-204ENST00000581226 A0A087WW49 117 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 URADA6NGE7 173 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 C2orf81A6NN90 581 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 SLCO1B7G3V0H7 640 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 UBE2CO00762 179 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 PTGESO14684 152 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 PLOD3O60568 738 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 SLCO2B1O94956 709 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 GGPS1O95749 300 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 ATP5BP06576 529 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 GPIP06744 558 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 RNF224P0DH78 156 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 CSTF2P33240 577 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 ASCL1P50553 236 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 PPP5CP53041 499 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 RBPJQ06330 500 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 VEZF1Q14119 521 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 TMEM187Q14656 261 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 ZFP69Q49AA0 526 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 CST9LP1Q5W188 147 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 BHLHB9Q6PI77 547 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 RBPMS2Q6ZRY4 209 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 KIRREL3Q8IZU9 778 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 MARVELD2Q8N4S9 558 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 NIPA2Q8N8Q9 360 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 XXYLT1Q8NBI6 393 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 WBP2Q969T9 261 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 ART5Q96L15 291 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 FAM20AQ96MK3 541 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 PANK2Q9BZ23 570 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 PITPNM3Q9BZ71 974 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 OR2B2Q9GZK3 357 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 CPVLQ9H3G5 476 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 RABEP2Q9H5N1 569 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 TRPV4Q9HBA0 871 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 FAM207AQ9NSI2 230 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 ATAD3AQ9NVI7 634 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 STUB1Q9UNE7 303 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 TNNQ9UQP3 1299 aa4.04□□□□□ -1.76
SMCHD1-204ENST00000581226 A0A087X002 238 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 MEIOCA2RUB1 952 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 ZNF821O75541 412 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 DDHD2O94830 711 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 ACSL3O95573 720 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CGAP01215 116 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 OR52Z1P0C646 297 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 IRF2P14316 349 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CEBPBP17676 345 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CYP11B2P19099 503 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CD22P20273 847 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 ACHEP22303 614 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 EEF1B2P24534 225 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 AZGP1P25311 298 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 EEF1DP29692 281 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 PTGER4P35408 488 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 LHX1P48742 406 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 BMXP51813 675 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 POLR2LP62875 67 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CUL3Q13618 768 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 HNRNPDQ14103 355 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 HERC3Q15034 1050 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 C14orf177Q52M58 125 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 SLC25A53Q5H9E4 307 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 PWWP2BQ6NUJ5 590 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 RPUSD3Q6P087 351 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 PSRC1Q6PGN9 363 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 LGI2Q8N0V4 545 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CCDC191Q8NCU4 936 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 OR6J1Q8NGC5 347 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 OR13C3Q8NGS6 347 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 PIGBQ92521 554 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 DYRK2Q92630 601 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 RMDN1Q96DB5 314 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 MAGED4Q96JG8 741 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CFAP57Q96MR6 1250 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 FEVQ99581 238 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CPNE1Q99829 537 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 P2RY12Q9H244 342 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CDH20Q9HBT6 801 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 PPANQ9NQ55 473 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 TBC1D7Q9P0N9 293 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CACNG5Q9UF02 275 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 GRID1Q9ULK0 1009 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 SMCHD1A6NHR9 2005 aa4.03□□□□□ -1.76
SMCHD1-204ENST00000581226 CLDN4O14493 209 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 ARPC2O15144 300 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 TBX10O75333 385 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 SAGP10523 405 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 DARSP14868 501 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 LIMK1P53667 647 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 GCNT1Q02742 428 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 PPARDQ03181 441 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 KLC1Q07866 573 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 ACSM1Q08AH1 577 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 ITGA7Q13683 1181 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 PHKG1Q16816 387 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 PDLIM3Q53GG5 364 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 TCP11X2Q5H9J9 407 aa4.02□□□□□ -1.77
SMCHD1-204ENST00000581226 TCTE1Q5JU00 501 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms