RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	GALNT16	Q8N428	558 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	METTL27	Q8N6F8	245 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRELID2	Q8N945	189 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR11G2	Q8NGC1	345 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2L8	Q8NGY9	312 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HMGCLL1	Q8TB92	370 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SSC4D	Q8WTU2	575 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ELMO1	Q92556	727 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LPGAT1	Q92604	370 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PNPLA2	Q96AD5	504 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CLIP3	Q96DZ5	547 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MFSD3	Q96ES6	412 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NPAS2	Q99743	824 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CARD6	Q9BX69	1037 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KRTAP4-6	Q9BYQ5	205 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LRRC40	Q9H9A6	602 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HAUS2	Q9NVX0	235 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SYBU	Q9NX95	663 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GPR83	Q9NYM4	423 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR6C2	Q9NZP2	312 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FBXL4	Q9UKA2	621 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IKZF3	Q9UKT9	509 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ASF1A	Q9Y294	204 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PTRH2	Q9Y3E5	179 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	COLEC10	Q9Y6Z7	277 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ADGRG4	Q8IZF6	3080 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NF1	P21359	2839 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MYO7B	Q6PIF6	2116 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NCOA6	Q14686	2063 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZCWPW2	A0A1B0GU75	182 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AGPS	O00116	658 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MATN2	O00339	956 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RASGRF2	O14827	1237 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FANCG	O15287	622 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	JRK	O75564	520 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	S1PR4	O95977	384 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TPM3	P06753	285 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KLK3	P07288	261 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	COX6A1	P12074	109 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	POU3F2	P20265	443 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RPS3	P23396	243 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MMP11	P24347	488 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ADRA1D	P25100	572 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MGAT1	P26572	445 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MST1	P26927	711 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GABRB3	P28472	473 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GRN	P28799	593 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SHMT2	P34897	504 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CYLC1	P35663	651 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MAGEA3	P43357	314 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MAGEA6	P43360	314 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ST13	P50502	369 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RAB28	P51157	221 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CLCN7	P51798	805 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NR0B1	P51843	470 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DCD	P81605	110 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CCZ1B	P86790	482 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CCZ1	P86791	482 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HSPA14	Q0VDF9	509 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CDH17	Q12864	832 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KCNJ11	Q14654	390 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GSE1	Q14687	1217 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KIR2DS3	Q14952	304 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SPA17	Q15506	151 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CYP2A13	Q16696	494 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SYT16	Q17RD7	645 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TYSND1	Q2T9J0	566 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C4orf17	Q53FE4	359 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ACSBG2	Q5FVE4	666 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VWA2	Q5GFL6	755 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TMTC4	Q5T4D3	741 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VWA5B1	Q5TIE3	1220 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MLIP	Q5VWP3	458 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C1QL3	Q5VWW1	255 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FIGLA	Q6QHK4	219 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ARHGEF18	Q6ZSZ5	1173 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TTLL10	Q6ZVT0	673 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RNF44	Q7L0R7	432 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PEX26	Q7Z412	305 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VN1R4	Q7Z5H5	301 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KCNMB4	Q86W47	210 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PAQR7	Q86WK9	346 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2L3	Q8NG85	312 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR4L1	Q8NH43	312 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PROKR1	Q8TCW9	393 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HEXDC	Q8WVB3	486 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	UBE2Q2	Q8WVN8	375 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FAM136A	Q96C01	138 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C8orf44	Q96CB5	159 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DCUN1D1	Q96GG9	259 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2A5	Q96R48	311 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	BAG1	Q99933	345 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLX1A	Q9BQ83	275 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	WDR77	Q9BQA1	342 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DPH2	Q9BQC3	489 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DHRS4	Q9BTZ2	278 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KIFC1	Q9BW19	673 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AICDA	Q9GZX7	198 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms