RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PLD6Q8N2A8 252 aaKnown RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 RHEBL1Q8TAI7 183 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 SMPDL3AQ92484 453 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 SPHK1Q9NYA1 384 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 AKAP7Q9P0M2 348 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-217ENST00000575711 PDP2Q9P2J9 529 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 RP1P56715 2156 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.25
RPAIN-217ENST00000575711 FAM149AA5PLN7 773 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 SYCE1LA8MT33 242 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 KIF1CO43896 1103 aaKnown RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 KERAO60938 352 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 S100BP04271 92 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 RBP1P09455 135 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 PYGBP11216 843 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 UGT2B7P16662 529 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 CDH3P22223 829 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 OAS2P29728 719 aaKnown RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 PEBP1P30086 187 aaKnown RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 RPA3P35244 121 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 HNMTP50135 292 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 CASP8Q14790 479 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 SF1Q15637 639 aaKnown RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 SPESP1Q6UW49 350 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 SUSD1Q6UWL2 747 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 CARFQ8N187 725 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 TCAIMQ8N3R3 496 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 PPFIBP2Q8ND30 876 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 EXT2Q93063 718 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 FBXL8Q96CD0 374 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 SCYL1Q96KG9 808 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 OR2A14Q96R47 310 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 RUFY1Q96T51 708 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 MAP3K3Q99759 626 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 TWSG1Q9GZX9 223 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 CCDC177Q9NQR7 707 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-217ENST00000575711 C1GALT1Q9NS00 363 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 CD274Q9NZQ7 290 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 PCDHB11Q9Y5F2 797 aa13.51□□□□□ -0.25
RPAIN-217ENST00000575711 A0A0J9YY10 115 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 NCF1BA6NI72 391 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 NCF1CA8MVU1 366 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 SUPT3HB4E1H0 165 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 E7ENX8 843 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 RGS16O15492 202 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 SUPT3HO75486 399 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 FKBP9O95302 570 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 TOP3BO95985 862 aaKnown RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 GSTA1P08263 222 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 NCF1P14598 390 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 CCND1P24385 295 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 CSTF2P33240 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 TBPL1P62380 186 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 TAP2Q03519 686 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 EIF3IQ13347 325 aaKnown RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 NAE1Q13564 534 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 TECRLQ5HYJ1 363 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 CDKL4Q5MAI5 379 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 THEMIS2Q5TEJ8 643 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 CAPN13Q6MZZ7 669 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ARHGAP22Q7Z5H3 698 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 LRRC56Q8IYG6 542 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 PDPRQ8NCN5 879 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 RCBTB1Q8NDN9 531 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 FLVCR1-AS1Q8TAF5 88 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 MED8Q96G25 268 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 LIN37Q96GY3 246 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 GPR78Q96P69 363 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ATOH8Q96SQ7 321 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 CMKLR1Q99788 373 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 PCBD2Q9H0N5 130 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ATG10Q9H0Y0 220 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ZNF768Q9H5H4 540 aaKnown RBP13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ABCF3Q9NUQ8 709 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 ZNF358Q9NW07 568 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 WWOXQ9NZC7 414 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 NUDT4Q9NZJ9 180 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 SEMA5BQ9P283 1151 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 DCDC2Q9UHG0 476 aa13.5□□□□□ -0.25
RPAIN-217ENST00000575711 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 CCDC187A0A096LP49 1063 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 A0A1W2PPV9 198 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 FOXO6A8MYZ6 492 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 UBXN8O00124 270 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 MAP3K7O43318 606 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 PRICKLE3O43900 615 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-217ENST00000575711 GLRA3O75311 464 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 CCNDBP1O95273 360 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 ZBTB11O95625 1053 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-217ENST00000575711 UQCRHP07919 91 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 ADRB1P08588 477 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 KRT4P19013 534 aa13.49□□□□□ -0.25
RPAIN-217ENST00000575711 PSMB5P28074 263 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms