RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SFRP1Q8N474 314 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 OR2T12Q8NG77 320 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 MAGEH1Q9H213 219 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 AKIP1Q9NQ31 210 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 SDR39U1Q9NRG7 319 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 FAM118AQ9NWS6 357 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 SNX5Q9Y5X3 404 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 SEC16AO15027 2179 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 PNMA8CA0A1B0GUJ8 204 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 PRKD3O94806 890 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 EOMESO95936 686 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 IDO1P14902 403 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 CSF2RAP15509 400 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 IDH2P48735 452 aaKnown RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 KRT33BQ14525 404 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 TRIM60Q495X7 471 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 CCDC92Q53HC0 331 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 XKR6Q5GH73 641 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 BROXQ5VW32 411 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 ZDHHC13Q8IUH4 622 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 SYT12Q8IV01 421 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 MFSD4AQ8N468 514 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 C12orf76Q8N812 135 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 ROPN1LQ96C74 230 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 PGAP3Q96FM1 320 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 COPS8Q99627 209 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 DPH2Q9BQC3 489 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 VNN3Q9NY84 501 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 RAPGEFL1Q9UHV5 662 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 LEF1Q9UJU2 399 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-215ENST00000575112 NEUROG3Q9Y4Z2 214 aa8.33□□□□□ -1.08
RPAIN-215ENST00000575112 LZTS3O60299 673 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 OAZ2O95190 189 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PAPSS2O95340 614 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 DNTTP04053 509 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 THRBP10828 461 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SYN1P17600 705 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 TNFRSF1BP20333 461 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PCMT1P22061 227 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 HNF1BP35680 557 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 POLD2P49005 469 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 TMBIM6P55061 237 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 DEFB103AP81534 67 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 RAPSNQ13702 412 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 BCL2A1Q16548 175 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 C6orf141Q5SZD1 244 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ARTNQ5T4W7 220 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 UBE2UQ5VVX9 321 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 GOLGA7Q7Z5G4 137 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 MRPL10Q7Z7H8 261 aaKnown RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 RIMKLAQ8IXN7 391 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 CHST14Q8NCH0 376 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PROKR1Q8TCW9 393 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 DOK4Q8TEW6 326 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 DACT3Q96B18 629 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 C8orf48Q96LL4 319 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 NSMCE3Q96MG7 304 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF558Q96NG5 402 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF347Q96SE7 839 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ITM2BQ9Y287 266 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 AP3D1O14617 1153 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 KCNK2O95069 426 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 HOXD9P28356 352 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SERPINA4P29622 427 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ACADVLP49748 655 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PRKAG1P54619 331 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SYT16Q17RD7 645 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 LRRC66Q68CR7 880 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 OR4F3Q6IEY1 312 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SUSD1Q6UWL2 747 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 OR5AK3PQ8NH89 298 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 BPIFB1Q8TDL5 484 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 FUBP3Q96I24 572 aaKnown RBP eCLIP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PANX1Q96RD7 426 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 VAPAQ9P0L0 249 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF229Q9UJW7 825 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PLAGL1Q9UM63 463 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SLC45A1Q9Y2W3 748 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 EVPLLA8MZ36 301 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 STK16O75716 305 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 COX7A2P14406 83 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 CRATP43155 626 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF135P52742 658 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 HK3P52790 923 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 RACK1P63244 317 aaKnown RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ELAVL2Q12926 359 aaKnown RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 FAM98BQ52LJ0 330 aaKnown RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SETMARQ53H47 684 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SULT1C3Q6IMI6 304 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 Q6ZPB1 254 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PAGE2Q7Z2X7 111 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 HEATR4Q86WZ0 1026 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 SCML4Q8N228 414 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 LILRA3Q8N6C8 439 aaPredicted RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF555Q8NEP9 628 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 RAB2BQ8WUD1 216 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PSKH2Q96QS6 385 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 HOPXQ9BPY8 73 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms