RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SEMA6DQ8NFY4 1073 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 TNIP2Q8NFZ5 429 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 ADAMTS15Q8TE58 950 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 RAB40AQ8WXH6 277 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 CNOT9Q92600 299 aaKnown RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 CENPIQ92674 756 aaPredicted RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 SGF29Q96ES7 293 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 BICD1Q96G01 975 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 JAKMIP1Q96N16 626 aaKnown RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 PLIN2Q99541 437 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 EFHD1Q9BUP0 239 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 SCAND2PQ9GZW5 306 aaPredicted RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 ABCG4Q9H172 646 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 SLC25A18Q9H1K4 315 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 Q9N2J8 555 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 SH3GLB2Q9NR46 395 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 THSD1Q9NS62 852 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 TMEM30AQ9NV96 361 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 AASSQ9UDR5 926 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 PTPRJQ12913 1337 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 MTORP42345 2549 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 RTTNQ86VV8 2226 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 MAP1AP78559 2803 aaPredicted RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 DCHS2Q6V1P9 2916 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 A0A1B0GVM2 712 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TMEM247A6NEH6 219 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TTC36A6NLP5 189 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 F8VP50 259 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TOM1L1O75674 476 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 IGHV4-34P06331 123 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 KRT7P08729 469 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 THEGLP0DJG4 465 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 ST6GAL1P15907 406 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CYP3A5P20815 502 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CD27P26842 260 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CDC25AP30304 524 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 MAT2AP31153 395 aaKnown RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 DCTP40126 519 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CCT6AP40227 531 aaKnown RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 STAT1P42224 750 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TAF6P49848 677 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 ELLP55199 621 aaPredicted RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CDH8P55286 799 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CDH15P55291 814 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 ERVPABLB-1P60509 514 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 DCAF7P61962 342 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 YPEL5P62699 121 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF234Q14588 700 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TMEM132DQ14C87 1099 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SLC18A3Q16572 532 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TSTQ16762 297 aaKnown RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF542PQ5EBM4 170 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 ARL13AQ5H913 290 aaPredicted RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 FAM69AQ5T7M9 428 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SLC22A25Q6T423 547 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 DENND5BQ6ZUT9 1274 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SLC25A45Q8N413 288 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SETD9Q8NE22 299 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 BCAS4Q8TDM0 211 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 C2orf15Q8WU43 125 aaKnown RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 UCMAQ8WVF2 138 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 HTR3CQ8WXA8 447 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 GTF3C6Q969F1 213 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 CADM1Q9BY67 442 aaKnown RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 FRMD8Q9BZ67 464 aaPredicted RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SYNDIG1Q9H7V2 258 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 MED4Q9NPJ6 270 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 DONSONQ9NYP3 566 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 TBC1D14Q9P2M4 693 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 NAALADL1Q9UQQ1 740 aa5.36□□□□□ -1.55
SF3B3-214ENST00000572365 COL27A1Q8IZC6 1860 aaPredicted RBP5.36□□□□□ -1.55
SF3B3-214ENST00000572365 SCN8AQ9UQD0 1980 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PHLPP2Q6ZVD8 1323 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 A0A1W2PPH5 198 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 TCRBV7S3A2A0A539 114 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 SLC22A23A1A5C7 686 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 CPED1A4D0V7 1026 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 LINC01548A6NM66 108 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PP2D1A8MPX8 630 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 ANKRD63C9JTQ0 380 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 TLR4O00206 839 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 VILLO15195 856 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PPFIA2O75334 1257 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 NEBLO76041 1014 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 OAS1P00973 400 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 FSHBP01225 129 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 IVLP07476 585 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 HMBSP08397 361 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 TPM1P09493 284 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 GCFC2P16383 781 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 TFEBP19484 476 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 NR1D1P20393 614 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 GNLYP22749 145 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 ACP1P24666 158 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 CD38P28907 300 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 EPHA8P29322 1005 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 CCR9P51686 369 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PROK1P58294 105 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 RPS14P62263 151 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms