RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PCYT2Q99447 389 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 LZTS2Q9BRK4 669 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SPRY4Q9C004 299 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SPRTNQ9H040 489 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 C17orf75Q9HAS0 396 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 MBNL1Q9NR56 388 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 PRMT7Q9NVM4 692 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 RMND1Q9NWS8 449 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 MCM9Q9NXL9 1143 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 VPS54Q9P1Q0 977 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CGNQ9P2M7 1197 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 IL17BQ9UHF5 180 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 MAN1B1Q9UKM7 699 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PADI3Q9ULW8 664 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 LIPGQ9Y5X9 500 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 POMT1Q9Y6A1 747 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ASTN2O75129 1339 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 KIAA1551Q9HCM1 1747 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CASZ1Q86V15 1759 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CACNA1SQ13698 1873 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 MYH13Q9UKX3 1938 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 A0A087WWV3 80 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 IGHV4-28A0A0C4DH34 117 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 OR6C76A6NM76 312 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 HEPACAM2A8MVW5 462 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 WDR46O15213 610 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 KCNAB3O43448 404 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 RGS14O43566 566 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 SPRY3O43610 288 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 PLEKHA8P1O95397 391 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 SYF2O95926 243 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 CH25HO95992 272 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 ATP5DP30049 168 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 PCGF2P35227 344 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 LONP1P36776 959 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 PRKCIP41743 596 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 FASLGP48023 281 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CLDN20P56880 219 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 HNRNPKP61978 463 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBR1-211ENST00000569971 SPAG1Q07617 926 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 PTPRCAPQ14761 206 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CTF1Q16619 201 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 VWC2Q2TAL6 325 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 KLHL26Q53HC5 615 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 KCNT1Q5JUK3 1230 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 RNASEH2BQ5TBB1 312 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 C12orf60Q5U649 245 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 SPECC1LQ69YQ0 1117 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 KRT39Q6A163 491 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 RGMBQ6NW40 437 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 ARMCX5Q6P1M9 558 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 PPP1R21Q6ZMI0 780 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 C15orf52Q6ZUT6 534 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 TMEM173Q86WV6 379 aaPredicted RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 VSTM4Q8IW00 320 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CHERPQ8IWX8 916 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 ZNF444Q8N0Y2 327 aaPredicted RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 CNBD1Q8NA66 436 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 GDAP1Q8TB36 358 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 GRAPLQ8TC17 118 aaPredicted RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 FAM162AQ96A26 154 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CCDC47Q96A33 483 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 DHX58Q96C10 678 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 ERO1AQ96HE7 468 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 TXNDC15Q96J42 360 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 PRMT6Q96LA8 375 aaPredicted RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 NLRP4Q96MN2 994 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 FCRL4Q96PJ5 515 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 GSDMAQ96QA5 445 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CSF3RQ99062 836 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 MGME1Q9BQP7 344 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CCDC94Q9BW85 323 aaPredicted RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 EBF3Q9H4W6 596 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 EQTNQ9NQ60 294 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 TCP11L1Q9NUJ3 509 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 SLC24A2Q9UI40 661 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 FBXL2Q9UKC9 423 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 KLHL20Q9Y2M5 609 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 LOXL2Q9Y4K0 774 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 TMEM184BQ9Y519 407 aaPredicted RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 SYNRGQ9UMZ2 1314 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 BTAF1O14981 1849 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 ROBO3Q96MS0 1386 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 CCDC88AQ3V6T2 1871 aa3.6□□□□□ -1.83
UBR1-211ENST00000569971 MYH14Q7Z406 1995 aaKnown RBP3.6□□□□□ -1.83
UBR1-211ENST00000569971 THSD7AQ9UPZ6 1657 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 MYMKA6NI61 221 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 USP27XA6NNY8 438 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 INAFM1C9JVW0 142 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 TRIM77I1YAP6 450 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 PLK4O00444 970 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 LAD1O00515 517 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 TO15178 435 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 XRCC3O43542 346 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 SSX4O60224 188 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 STX10O60499 249 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 SYNCRIPO60506 623 aaKnown RBP3.59□□□□□ -1.83
UBR1-211ENST00000569971 BBOX1O75936 387 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 PDGFRAP16234 1089 aa3.59□□□□□ -1.83
UBR1-211ENST00000569971 HOXB6P17509 224 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms