RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 FAM234BA2RU67 622 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 CLDN24A6NM45 220 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ADRA1AP35348 466 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 DDOSTP39656 456 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 FOXD4Q12950 439 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 IHHQ14623 411 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 LRRTM3Q86VH5 581 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 SVOPLQ8N434 492 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 AMER2Q8N7J2 671 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 TBATAQ96M53 351 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 TIGARQ9NQ88 270 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 AASDHPPTQ9NRN7 309 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 KLHL20Q9Y2M5 609 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 M0R129 80 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 RGS5O15539 181 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 CAPN1P07384 714 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 FHP07954 510 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 PRR35P0CG20 571 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 SLC19A1P41440 591 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 PIK3CGP48736 1102 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 WNT3AP56704 352 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 SEMA3AQ14563 771 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 MAD2L1BPQ15013 274 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 DUSP7Q16829 419 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 PARP15Q460N3 678 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ADHFE1Q8IWW8 467 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 LSMEM1Q8N8F7 131 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 TTC29Q8NA56 475 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 TSPAN17Q96FV3 270 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ATOH8Q96SQ7 321 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 SLC39A8Q9C0K1 460 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 POLR3HQ9Y535 204 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 OR6C70A6NIJ9 312 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 NT5C1B-RDH14C9J2C7 533 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 NCAM2O15394 837 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 CAPN5O15484 640 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 GATMP50440 423 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 PRKCDQ05655 676 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 C18orf21Q32NC0 220 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ZNF648Q5T619 568 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 TUBA3EQ6PEY2 450 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 RANBP10Q6VN20 620 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 FBXO39Q8N4B4 442 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 OR10T2Q8NGX3 314 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 MRM3Q9HC36 420 aaKnown RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ACOXLQ9NUZ1 547 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 ABI2Q9NYB9 513 aaPredicted RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 SATB2Q9UPW6 733 aa15.89■□□□□ 0.13
LINC00554-201ENST00000564841 KIAA0100Q14667 2235 aaKnown RBP15.89■□□□□ 0.13
LINC00554-201ENST00000564841 A0A0U1RQF3 1178 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 WISP3O95389 354 aaPredicted RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 IGHA2P01877 340 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 HOXA9P31269 272 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 MGAT3Q09327 533 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 FADDQ13158 208 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 STARD3Q14849 445 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 TYSND1Q2T9J0 566 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 TRIM60Q495X7 471 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 OVOS1Q6IE37 1185 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 RAB43Q86YS6 212 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 FAM217AQ8IXS0 508 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 ATPAF2Q8N5M1 289 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 PCSK9Q8NBP7 692 aaKnown RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 OR4M1Q8NGD0 313 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 APH1BQ8WW43 257 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SLC2A13Q96QE2 648 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 MKRN2Q9H000 416 aaKnown RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 STARD7Q9NQZ5 370 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SLC25A37Q9NYZ2 338 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 GABRDO14764 452 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 ZNF682O95780 498 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SLC26A3P40879 764 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 LHX1P48742 406 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SERPINH1P50454 418 aaKnown RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SPATS1Q496A3 300 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 RFTN2Q52LD8 501 aaPredicted RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 ARMC4Q5T2S8 1044 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 CPZQ66K79 652 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 CCSAPQ6IQ19 270 aaPredicted RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SPATA19Q7Z5L4 167 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 METTL23Q86XA0 190 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 FAM109AQ8N4B1 249 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 CLHC1Q8NHS4 586 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 PMEPA1Q969W9 287 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 VAT1Q99536 393 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 BRINP2Q9C0B6 783 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SIRT5Q9NXA8 310 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 KCNN3Q9UGI6 736 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 SRRDQ9UH36 339 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 FBXO9Q9UK97 447 aaPredicted RBP15.88■□□□□ 0.13
LINC00554-201ENST00000564841 ZNF451Q9Y4E5 1061 aa15.88■□□□□ 0.13
LINC00554-201ENST00000564841 TYW5A2RUC4 315 aaKnown RBP15.87■□□□□ 0.13
LINC00554-201ENST00000564841 AREL1O15033 823 aa15.87■□□□□ 0.13
LINC00554-201ENST00000564841 KATNA1O75449 491 aa15.87■□□□□ 0.13
LINC00554-201ENST00000564841 HMBSP08397 361 aa15.87■□□□□ 0.13
LINC00554-201ENST00000564841 CKBP12277 381 aa15.87■□□□□ 0.13
LINC00554-201ENST00000564841 GRIK1P39086 918 aa15.87■□□□□ 0.13
LINC00554-201ENST00000564841 ERVK-8P63133 956 aa15.87■□□□□ 0.13
LINC00554-201ENST00000564841 ALDH6A1Q02252 535 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms