RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HNRNPH2P55795 449 aaKnown RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 SCARB2Q14108 478 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 FGFBP1Q14512 234 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 CRYMQ14894 314 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 TMEM266Q2M3C6 531 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 EIF2S3LQ2VIR3 472 aaKnown RBP4.75□□□□□ -1.65
LINC00254-201ENST00000563416 NCEH1Q6PIU2 408 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 QSOX2Q6ZRP7 698 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 PLA2G4DQ86XP0 818 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 GALNT13Q8IUC8 556 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 NEK9Q8TD19 979 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 AFAP1L1Q8TED9 768 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 SEPT1Q8WYJ6 367 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 DNASE2BQ8WZ79 361 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 POMGNT1Q8WZA1 660 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 RND1Q92730 232 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 BADQ92934 168 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 HARBI1Q96MB7 349 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 PCYT2Q99447 389 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 TRPV6Q9H1D0 765 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 KCNMB3Q9NPA1 279 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 TXLNGQ9NUQ3 528 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 MRGBPQ9NV56 204 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 EHD2Q9NZN4 543 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 CEPT1Q9Y6K0 416 aa4.75□□□□□ -1.65
LINC00254-201ENST00000563416 UMODL1Q5DID0 1318 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 IGSF9BQ9UPX0 1349 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PRAC2D3DTV9 90 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 TULP2O00295 520 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 MSH4O15457 936 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SLC37A4O43826 429 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 GJB3O75712 270 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PSMD10O75832 226 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 TDP2O95551 362 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SMIM10L2AP0DMW4 78 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SMIM10L2BP0DMW5 78 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 GCFC2P16383 781 aaKnown RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SLC26A2P50443 739 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 DLX5P56178 289 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 GOLGA8DPQ0D2H9 430 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 ZBTB17Q13105 803 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 OLIG2Q13516 323 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PRPF4BQ13523 1007 aaKnown RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 TRIM29Q14134 588 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PTGISQ16647 500 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 COL28A1Q2UY09 1125 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 FAM76BQ5HYJ3 339 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PLPPR4Q7Z2D5 763 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 CACNA2D4Q7Z3S7 1137 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 RPAINQ86UA6 219 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SERINC5Q86VE9 423 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SNX32Q86XE0 403 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 CCDC60Q8IWA6 550 aaPredicted RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 FOXRED2Q8IWF2 684 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 CHERPQ8IWX8 916 aaKnown RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 TDHQ8IZJ6 230 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 C17orf53Q8N3J3 647 aaPredicted RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 RDM1Q8NG50 284 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SORCS1Q8WY21 1168 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 FAM149B1Q96BN6 582 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 RIT2Q99578 217 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 EPYCQ99645 322 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PIP5K1AQ99755 562 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 ZNF577Q9BSK1 485 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 OR10A4Q9H209 315 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 SMARCAD1Q9H4L7 1026 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 RABEP2Q9H5N1 569 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 KIF9Q9HAQ2 790 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 CCDC177Q9NQR7 707 aaPredicted RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 ERAP1Q9NZ08 941 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 INTS6Q9UL03 887 aaKnown RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 CORO1CQ9ULV4 474 aaPredicted RBP4.74□□□□□ -1.65
LINC00254-201ENST00000563416 AMDHD2Q9Y303 409 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 KCNE2Q9Y6J6 123 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 PRUNE2Q8WUY3 3088 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 COL1A2P08123 1366 aa4.74□□□□□ -1.65
LINC00254-201ENST00000563416 NRCAMQ92823 1304 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 MBLAC1A4D2B0 266 aaPredicted RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 MYO1GB0I1T2 1018 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 DDX39AO00148 427 aaKnown RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 UBE2CO00762 179 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 KRT86O43790 486 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 BAG2O95816 211 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 IQCF3P0C7M6 154 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 KRT10P13645 584 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 CSF2RAP15509 400 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 U2AF2P26368 475 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 BDKRB2P30411 391 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 SFNP31947 248 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 RFC2P35250 354 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 USP8P40818 1118 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PRAMEP78395 509 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 SP4Q02446 784 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 FOXM1Q08050 763 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 ACSM2AQ08AH3 577 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PPP2R5CQ13362 524 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 ORC2Q13416 577 aaPredicted RBP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC00254-201ENST00000563416 KRT81Q14533 505 aa4.73□□□□□ -1.65
LINC00254-201ENST00000563416 GPNMBQ14956 572 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms