RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	SRPX2	O60687	465 aa	Predicted RBP	13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	FTCD	O95954	541 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	LDLR	P01130	860 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	RPN2	P04844	631 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	APOA4	P06727	396 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	CSE1L	P55060	971 aa	Known RBP	13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	SLC9A5	Q14940	896 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	NR6A1	Q15406	480 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	NKG7	Q16617	165 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	FAM214A	Q32MH5	1076 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	FASTKD1	Q53R41	847 aa	Known RBP	13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	TCTE1	Q5JU00	501 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	KIRREL2	Q6UWL6	708 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	TTLL10	Q6ZVT0	673 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	KIAA1328	Q86T90	577 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	CUZD1	Q86UP6	607 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	RNF10	Q8N5U6	811 aa	Known RBP	13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	LMNTD1	Q8N9Z9	388 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	HMGCLL1	Q8TB92	370 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	ATG4A	Q8WYN0	398 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	TM9SF4	Q92544	642 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	SPSB2	Q99619	263 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	BAG1	Q99933	345 aa	Predicted RBP	13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	TSSK1B	Q9BXA7	367 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	CHRAC1	Q9NRG0	131 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	IL1RAPL1	Q9NZN1	696 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	NTNG1	Q9Y2I2	539 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	TCAF1	Q9Y4C2	921 aa		13.09	□□□□□ -0.31
RNF31-223	ENST00000560754	ABCA12	Q86UK0	2595 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	VSTM2B	A6NLU5	285 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	IQCF5	A8MTL0	148 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	SOCS6	O14544	535 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	PRMT5	O14744	637 aa	Predicted RBP	13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	RASGRF2	O14827	1237 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	DSCR3	O14972	297 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	CD3EAP	O15446	510 aa	Known RBP	13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	GRIA3	P42263	894 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	GRM7	Q14831	915 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	SF1	Q15637	639 aa	Known RBP	13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	CYP2A13	Q16696	494 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	PRAMEF13	Q5VWM6	474 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	PPP1R21	Q6ZMI0	780 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	COX15	Q7KZN9	410 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	DCUN1D3	Q8IWE4	304 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	TXLNB	Q8N3L3	684 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	LKAAEAR1	Q8TD35	194 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	RAD51AP1	Q96B01	352 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	RBSN	Q9H1K0	784 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	P2RY12	Q9H244	342 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	SLC6A20	Q9NP91	592 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	CUTC	Q9NTM9	273 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	INTS7	Q9NVH2	962 aa	Known RBP	13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	MAP10	Q9P2G4	905 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	ZNF148	Q9UQR1	794 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	SLC5A6	Q9Y289	635 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	PCDHGA10	Q9Y5H3	936 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	HS3ST3B1	Q9Y662	390 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	APC	P25054	2843 aa		13.08	□□□□□ -0.32
RNF31-223	ENST00000560754	ANKUB1	A6NFN9	424 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	KPNA5	O15131	536 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	CTSV	O60911	334 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	CLDN1	O95832	211 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	ETS1	P14921	441 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	TTPA	P49638	278 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	PRAME	P78395	509 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	AARS2	Q5JTZ9	985 aa	Known RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	PCID2	Q5JVF3	399 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	LDB1	Q86U70	411 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	KCNMB4	Q86W47	210 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	KRT222	Q8N1A0	295 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	OR2A1	Q8NGT9	310 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	CFAP61	Q8NHU2	1237 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	IL17F	Q96PD4	163 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	MRM3	Q9HC36	420 aa	Known RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	RAB6B	Q9NRW1	208 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	TREX1	Q9NSU2	369 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	IRAK4	Q9NWZ3	460 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	ANAPC5	Q9UJX4	755 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	FBXL4	Q9UKA2	621 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	SLC39A10	Q9ULF5	831 aa		13.07	□□□□□ -0.32
RNF31-223	ENST00000560754	DRG1	Q9Y295	367 aa	Known RBP	13.07	□□□□□ -0.32
RNF31-223	ENST00000560754		E7EVH7	732 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	C1orf105	O95561	183 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	IFNB1	P01574	187 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	APRT	P07741	180 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	RPS3	P23396	243 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	MCM3	P25205	808 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	GLRB	P48167	497 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	NPY2R	P49146	381 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	WASHC2D	Q5SRD0	308 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	AGAP7P	Q5VUJ5	663 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	ATG9B	Q674R7	924 aa		13.06	□□□□□ -0.32
RNF31-223	ENST00000560754	FBXO42	Q6P3S6	717 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms