RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 Q9H521 79 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 ARNT2Q9HBZ2 717 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 HPS4Q9NQG7 708 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 DDX18Q9NVP1 670 aaKnown RBP6.9□□□□□ -1.31
ZEB1-216ENST00000559496 MOCS1Q9NZB8 636 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 EPS15L1Q9UBC2 864 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 HAO1Q9UJM8 370 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 FBXO10Q9UK96 956 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 HS3ST2Q9Y278 367 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.31
ZEB1-216ENST00000559496 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ARPC4-TTLL3A0A0A6YYG9 625 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 LOC285095A0A1B0GVY8 99 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TCRBV9S1A1TA0A576 114 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 MAGEB16A2A368 324 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 POC1B-GALNT4F8VUJ3 575 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 H3BNX3 289 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TRIM24O15164 1050 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 GSTA4O15217 222 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 DENRO43583 198 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PEX14O75381 377 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TCEA3O75764 348 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 OR6B1O95007 311 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 NDST3O95803 873 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 IGSF6O95976 241 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 EPOP01588 193 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 S100BP04271 92 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 FGF1P05230 155 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 POLBP06746 335 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ALOX5P09917 674 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CISD3P0C7P0 127 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ATXN1LP0C7T5 689 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 SRCP12931 536 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 HLA-DPA1P20036 260 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CD9P21926 228 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 KCNA5P22460 613 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CA4P22748 312 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 GDI1P31150 447 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 SLC5A2P31639 672 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 IFNA8P32881 189 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CLK1P49759 484 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 AP1S1P61966 158 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 KDSRQ06136 332 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 RUNX3Q13761 415 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PTK2BQ14289 1009 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 POU6F1Q14863 301 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 EFTUD2Q15029 972 aaKnown RBP eCLIP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PDK3Q15120 406 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 GEN1Q17RS7 908 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 KLHL38Q2WGJ6 581 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TRMT5Q32P41 509 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 NADK2Q4G0N4 442 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PCID2Q5JVF3 399 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 SIRPB2Q5JXA9 342 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 SPANXN3Q5MJ09 141 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 NCEH1Q6PIU2 408 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 UGT2A3Q6UWM9 527 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 DGLUCYQ7Z3D6 616 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CENPSQ8N2Z9 138 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 RYBPQ8N488 228 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PCDH20Q8N6Y1 951 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 STPG3Q8N7X2 389 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PPHLN1Q8NEY8 458 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 OR6Y1Q8NGX8 325 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ZFP28Q8NHY6 868 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ANKRD49Q8WVL7 239 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 FGF14Q92915 247 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TTC17Q96AE7 1141 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ISG20Q96AZ6 181 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ERP27Q96DN0 273 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 GIMAP5Q96F15 307 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 AJUBAQ96IF1 538 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CEP19Q96LK0 163 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CYTH2Q99418 400 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TRMT61BQ9BVS5 477 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 TDRD1Q9BXT4 1180 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CADM1Q9BY67 442 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CIPCQ9C0C6 399 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PPCSQ9HAB8 311 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PLAC1Q9HBJ0 212 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CATSPERZQ9NTU4 200 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 DEC1Q9P2X7 70 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 ERVW-1Q9UQF0 538 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 CHKBQ9Y259 395 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 SLC27A6Q9Y2P4 619 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 PCDHGB3Q9Y5G1 929 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 RAI2Q9Y5P3 530 aa6.89□□□□□ -1.31
ZEB1-216ENST00000559496 RANBP2P49792 3224 aaKnown RBP6.89□□□□□ -1.31
ZEB1-216ENST00000559496 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 FAM237BA0A1B0GVD1 139 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CCDC78A2IDD5 438 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 HEATR9A2RTY3 570 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CCDC160A6NGH7 325 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 SNTNA6NMZ2 147 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 M0QX08 132 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-216ENST00000559496 CDH16O75309 829 aa6.88□□□□□ -1.31
ZEB1-216ENST00000559496 GUCY1B2O75343 617 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms