RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 FCRL6Q6DN72 434 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 ZNF470Q6ECI4 717 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 CNSTQ6PJW8 725 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 ZNF655Q8N720 491 aaPredicted RBP16.35■□□□□ 0.21
LRRC28-210ENST00000558879 GSDMBQ8TAX9 411 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 GRK7Q8WTQ7 553 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 ZNF285Q96NJ3 590 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 DHCR7Q9UBM7 475 aaKnown RBP16.35■□□□□ 0.21
LRRC28-210ENST00000558879 SLC39A10Q9ULF5 831 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 VPS9D1Q9Y2B5 631 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 PADI2Q9Y2J8 665 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 KLHL20Q9Y2M5 609 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 MED16Q9Y2X0 877 aa16.35■□□□□ 0.21
LRRC28-210ENST00000558879 SETXQ7Z333 2677 aaKnown RBP16.35■□□□□ 0.21
LRRC28-210ENST00000558879 DOPEY2Q9Y3R5 2298 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 PTPN13Q12923 2485 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 MAGEB16A2A368 324 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 SDR42E2A6NKP2 422 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 ZSCAN12O43309 604 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 CNOT3O75175 753 aaKnown RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 PSIP1O75475 530 aaKnown RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 USP1O94782 785 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 PSMB5P28074 263 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 SLC1A2P43004 574 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 CLCN7P51798 805 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 KCNC4Q03721 635 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 NEPROQ6NW34 567 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 MRPL14Q6P1L8 145 aaKnown RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 TTC23LQ6PF05 361 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 ASB18Q6ZVZ8 466 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 C2orf73Q8N5S3 287 aaPredicted RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 ZBTB2Q8N680 514 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 GIMAP7Q8NHV1 300 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 SLCO2A1Q92959 643 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 SIGLEC10Q96LC7 697 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 FOPNLQ96NB1 174 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 ING2Q9H160 280 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 ACSS2Q9NR19 701 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 INTS7Q9NVH2 962 aaKnown RBP16.34■□□□□ 0.21
LRRC28-210ENST00000558879 GALPQ9UBC7 116 aa16.34■□□□□ 0.21
LRRC28-210ENST00000558879 GOLGA6L10A0A0M3HER8 536 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 ARHGEF33A8MVX0 844 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 TARM1B6A8C7 271 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 GOLGA8MH3BSY2 632 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 ZNF185O15231 689 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 KIF5CO60282 957 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 ITGAXP20702 1163 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 GRIA3P42263 894 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 CYP2A13Q16696 494 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 C1orf189Q5VU69 101 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 FIGLAQ6QHK4 219 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 NEK10Q6ZWH5 1172 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 RAB43Q86YS6 212 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 DENND6AQ8IWF6 608 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 LMNTD2Q8IXW0 634 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 OR2L3Q8NG85 312 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 OR2A1Q8NGT9 310 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 MAGEC3Q8TD91 643 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 SKA2Q8WVK7 121 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-210ENST00000558879 FAM136AQ96C01 138 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 SLC30A3Q99726 388 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 SLC22A11Q9NSA0 550 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 TXLNGQ9NUQ3 528 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-210ENST00000558879 FLNBO75369 2602 aaKnown RBP16.33■□□□□ 0.2
LRRC28-210ENST00000558879 CPAMD8Q8IZJ3 1885 aa16.33■□□□□ 0.2
LRRC28-210ENST00000558879 RELNP78509 3460 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 MYO1CO00159 1063 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 CTSVO60911 334 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 ONECUT2O95948 504 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 F7P08709 466 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 DCDP81605 110 aaKnown RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 FOXK1P85037 733 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 ATP1A4Q13733 1029 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 SF1Q15637 639 aaKnown RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 KLHL38Q2WGJ6 581 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 NKAIN1Q4KMZ8 207 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 ACSBG2Q5FVE4 666 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 ZC3H12BQ5HYM0 836 aaKnown RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 ZNF549Q6P9A3 640 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 MED25Q71SY5 747 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 MRGPREQ86SM8 312 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 MCATQ8IVS2 390 aaKnown RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 PPIL6Q8IXY8 311 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 RAB42Q8N4Z0 105 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 TMEM102Q8N9M5 508 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 OR2Y1Q8NGV0 311 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 DLG3Q92796 817 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 KCNJ9Q92806 393 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 ZUFSPQ96AP4 578 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 FKBP10Q96AY3 582 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 NDC1Q9BTX1 674 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 SLC25A23Q9BV35 468 aa16.32■□□□□ 0.2
LRRC28-210ENST00000558879 FBXO6Q9NRD1 293 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-210ENST00000558879 KLHL42Q9P2K6 505 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms