RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ZDHHC7Q9NXF8 308 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PCDHGB2Q9Y5G2 931 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 RP1L1Q8IWN7 2480 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ITGA10O75578 1167 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TXNDC12O95881 172 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 G0S2P27469 103 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 CCR1P32246 355 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 XKP51811 444 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 MBLAC2Q68D91 279 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 GALNTL5Q7Z4T8 443 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF546Q86UE3 836 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TICAM1Q8IUC6 712 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SLC5A8Q8N695 610 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 COG8Q96MW5 612 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 DNAJC5BQ9UF47 199 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PITPNM1O00562 1244 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SCO1O75880 301 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SULT1C4O75897 302 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 EDNRAP25101 427 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ARL4DP49703 201 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TOMM20Q15388 145 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 CXXC5Q7LFL8 322 aaKnown RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 GPR156Q8NFN8 814 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 OR8K5Q8NH50 307 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 UPF1Q92900 1129 aaKnown RBP eCLIP3.61□□□□□ -1.835e-6■□□□□ 10.5
ATXN3-248ENST00000558190 TMEM74Q96NL1 305 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 DSN1Q9H410 356 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 CPNE5Q9HCH3 593 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 GTF2IRD1Q9UHL9 959 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SMCO3A2RU48 225 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 MAGEB4O15481 346 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 FABP3P05413 133 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PAICSP22234 425 aaKnown RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 EIF2DP41214 584 aaKnown RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 MAGEA11P43364 429 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 KIR3DL1P43629 444 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 NDUFV1P49821 464 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF169Q14929 603 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TIGD3Q6B0B8 471 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ST8SIA4Q92187 359 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF471Q9BX82 626 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 RNF32Q9H0A6 362 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ARHGEF4Q9NR80 690 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SGCEO43556 437 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 IFNA21P01568 189 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 METTL11BQ5VVY1 283 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 HDDC3Q8N4P3 179 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 OR2T35Q8NGX2 323 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SLC2A14Q8TDB8 520 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF416Q9BWM5 594 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 NOS2P35228 1153 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 LHX1P48742 406 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 NHSL2Q5HYW2 709 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SLC2A11Q9BYW1 496 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 MUC13Q9H3R2 512 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 DIRAS1O95057 198 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 LAMP2P13473 410 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 DNASE1L1P49184 302 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 FOXB2Q5VYV0 432 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 FAM117BQ6P1L5 589 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ZDHHC14Q8IZN3 488 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 STK35Q8TDR2 534 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PEX13Q92968 403 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 B3GNT2Q9NY97 397 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PRAMEF1O95521 474 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 FAUP35544 74 aaKnown RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ST8SIA6P61647 398 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 AADACL4Q5VUY2 407 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 BLOC1S3Q6QNY0 202 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 OR6M1Q8NGM8 313 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 OR13J1Q8NGT2 312 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SEC22AQ96IW7 307 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 MGAT4BQ9UQ53 548 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TLR4O00206 839 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF250P15622 560 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 RGS6P49758 472 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 GPSM3Q9Y4H4 160 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SRCP12931 536 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 NAXEQ8NCW5 288 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ABHD4Q8TB40 342 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 MAGEL2Q9UJ55 1249 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PCDHGA7Q9Y5G6 932 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 NRLP54845 237 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SELENBP1Q13228 472 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 ADPRMQ3LIE5 342 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PLD6Q8N2A8 252 aaKnown RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 OR10G2Q8NGC3 310 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 CASTOR1Q8WTX7 329 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TKTL2Q9H0I9 626 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 VNN3Q9NY84 501 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 APBA3O96018 575 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SPNP16150 400 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 HTR2AP28223 471 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 PM20D1Q6GTS8 502 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 GLIS1Q8NBF1 620 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 LPAR1Q92633 364 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 NFKBIZQ9BYH8 718 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 SNRNP70P08621 437 aaKnown RBP3.61□□□□□ -1.83
ATXN3-248ENST00000558190 TAS2R41P59536 307 aa3.61□□□□□ -1.83
ATXN3-248ENST00000558190 FAM174BQ3ZCQ3 159 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms