RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 UCHL3P15374 230 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 DESP17661 470 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 CDH3P22223 829 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 MMP11P24347 488 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 MST1P26927 711 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 MTIF2P46199 727 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 NSFP46459 744 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 ZNF135P52742 658 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 IST1P53990 364 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 CDH6P55285 790 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 FOXL2P58012 376 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 RPL26P61254 145 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 TAGLNQ01995 201 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 RBPJQ06330 500 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 LTBQ06643 244 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 ITKQ08881 620 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 MFAP5Q13361 173 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 DPYSQ14117 519 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 INAQ16352 499 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 C3AR1Q16581 482 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 PPP6R3Q5H9R7 873 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 PDPK2PQ6A1A2 396 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 FAAH2Q6GMR7 532 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 DNAJC24Q6P3W2 148 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 MEX3BQ6ZN04 569 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 LINC00696Q6ZRV3 163 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 APTXQ7Z2E3 356 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 PHF13Q86YI8 300 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 PSTKQ8IV42 348 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 TMEM151BQ8IW70 566 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 LPCAT1Q8NF37 534 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 ANKRD20A12PQ8NF67 263 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 SPATA3Q8NHX4 192 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 EID2BQ96D98 161 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 MCEEQ96PE7 176 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 PCDHB18PQ96TA0 734 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 NDC1Q9BTX1 674 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 NUP85Q9BW27 656 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 SGPP1Q9BX95 441 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 AP1M1Q9BXS5 423 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 TDRD1Q9BXT4 1180 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 POLR1EQ9GZS1 481 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 NUP62CLQ9H1M0 184 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 ABI3Q9P2A4 366 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 NDOR1Q9UHB4 597 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 PCSK1NQ9UHG2 260 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 RPL26L1Q9UNX3 145 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 ATP6V1DQ9Y5K8 247 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 AP1M2Q9Y6Q5 423 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 FLNAP21333 2647 aaKnown RBP6.6□□□□□ -1.35
ATXN3-236ENST00000556220 TMEM82A0PJX8 343 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ANKRD66B4E2M5 251 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 SOCS6O14544 535 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 SLC19A2O60779 497 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ALOX12BO75342 701 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 POP7O75817 140 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 GFPT2O94808 682 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 KLHL18O94889 574 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 CRYABP02511 175 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 MTHFD1P11586 935 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ST6GAL1P15907 406 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 POLR2CP19387 275 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 HOXA5P20719 270 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 CA4P22748 312 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PRDX3P30048 256 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 LMAN1P49257 510 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 DCDC1P59894 354 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ARG2P78540 354 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 OGDHQ02218 1023 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 DMPKQ09013 629 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 TMEM115Q12893 351 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 FOXD4Q12950 439 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PRKAA1Q13131 559 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 GALNT3Q14435 633 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 MAN2A1Q16706 1144 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 LONRF1Q17RB8 773 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 NKAIN1Q4KMZ8 207 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 KHDC1Q4VXA5 237 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 C1orf189Q5VU69 101 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ALS2CLQ60I27 953 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 RHBDD2Q6NTF9 364 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 DCUN1D2Q6PH85 259 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 KIRREL2Q6UWL6 708 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 FAM83HQ6ZRV2 1179 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 TAOK1Q7L7X3 1001 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 TMC3Q7Z5M5 1100 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 LUZP1Q86V48 1076 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 AMZ2Q86W34 360 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 TRAPPC5Q8IUR0 188 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 GPR135Q8IZ08 494 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ATPAF2Q8N5M1 289 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 GPR26Q8NDV2 337 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 OR4E2Q8NGC2 313 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PROKR1Q8TCW9 393 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 HAS2Q92819 552 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 THOC3Q96J01 351 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PDLIM2Q96JY6 352 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PEBP4Q96S96 227 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms