RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MYZAPP0CAP1 466 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 POLR2CP19387 275 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 OAS2P29728 719 aaKnown RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 PRDX3P30048 256 aaKnown RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 PEBP1P30086 187 aaKnown RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 GLRBP48167 497 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 TRA2AQ13595 282 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 DHRS13Q6UX07 377 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 CDHR3Q6ZTQ4 885 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 FRA10AC1Q70Z53 315 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 ARHGAP22Q7Z5H3 698 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 TMPRSS12Q86WS5 348 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 SLITRK4Q8IW52 837 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 LMNTD1Q8N9Z9 388 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 OR2A1Q8NGT9 310 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 NUDT22Q9BRQ3 303 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 SGPP1Q9BX95 441 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 PITPNM3Q9BZ71 974 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 SSU72Q9NP77 194 aaKnown RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 SPHK1Q9NYA1 384 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 UTP6Q9NYH9 597 aaKnown RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 ACTR10Q9NZ32 417 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 POMT2Q9UKY4 750 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 ATXN7L1Q9ULK2 861 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 IGHV5-10-1A0A0J9YXX1 117 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 PABPN1LA6NDY0 278 aaKnown RBP12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TMX2-CTNND1H3BSU7 103 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 COPEO14579 308 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TAPBPO15533 448 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TYROBPO43914 113 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SASH3O75995 380 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 MT-CO3P00414 261 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 ANKRD34CP0C6C1 535 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 THRAP10827 490 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 CCND1P24385 295 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 CCKBRP32239 447 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 ID4P47928 161 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SLC6A12P48065 614 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 PDX1P52945 283 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SLC5A12Q1EHB4 618 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 ARMC6Q6NXE6 501 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 METTL2BQ6P1Q9 378 aaKnown RBP12.25□□□□□ -0.45
SYNE2-219ENST00000555323 MBOAT1Q6ZNC8 495 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 RBM44Q6ZP01 1051 aaKnown RBP12.25□□□□□ -0.45
SYNE2-219ENST00000555323 PRSS42Q7Z5A4 293 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SRRM1Q8IYB3 904 aaKnown RBP12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SYTL1Q8IYJ3 562 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 DCBLD1Q8N8Z6 715 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 KLHL6Q8WZ60 621 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TMEM74Q96NL1 305 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SMC6Q96SB8 1091 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 RUFY1Q96T51 708 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 CHRNA10Q9GZZ6 450 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 PCBD2Q9H0N5 130 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 C1GALT1Q9NS00 363 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 INTS7Q9NVH2 962 aaKnown RBP12.25□□□□□ -0.45
SYNE2-219ENST00000555323 NUDT4Q9NZJ9 180 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TMEM9Q9P0T7 183 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 XPR1Q9UBH6 696 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 EMCNQ9ULC0 261 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TMCO1Q9UM00 188 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 PLLPQ9Y342 182 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 PCDHB11Q9Y5F2 797 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 KLK4Q9Y5K2 254 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 SPEGQ15772 3267 aa12.25□□□□□ -0.45
SYNE2-219ENST00000555323 TLCD2A6NGC4 264 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 GOLGA6L10A6NI86 522 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 ISM1B1AKI9 464 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 UBXN8O00124 270 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 IPO13O94829 963 aaKnown RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 CREB1P16220 341 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 UGT2B7P16662 529 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 NPPBP16860 134 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 ALDH18A1P54886 795 aaKnown RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 GFERP55789 205 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 PPP1CAP62136 330 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 PRDX1Q06830 199 aaKnown RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 NAE1Q13564 534 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 ISXQ2M1V0 245 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 PTCHD3Q3KNS1 767 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 CCDC153Q494R4 210 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 CCDC157Q569K6 752 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 N4BP2L1Q5TBK1 243 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 HES3Q5TGS1 186 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 AGBL2Q5U5Z8 902 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 CAPN13Q6MZZ7 669 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 IRGCQ6NXR0 463 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 SPESP1Q6UW49 350 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 SUSD1Q6UWL2 747 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 LCTLQ6UWM7 567 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 TMPRSS7Q7RTY8 843 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 KMT5CQ86Y97 462 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 C2orf73Q8N5S3 287 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 PPFIBP2Q8ND30 876 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 ZUFSPQ96AP4 578 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms