RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 ITGA3P26006 1051 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 MAP2K2P36507 400 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 LHX1P48742 406 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 ZNF41P51814 821 aaPredicted RBP4.72□□□□□ -1.65
USP15-213ENST00000549268 CA9Q16790 459 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 UGP2Q16851 508 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 GTDC1Q4AE62 458 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 CYP4A22Q5TCH4 519 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 ERN2Q76MJ5 926 aaKnown RBP4.72□□□□□ -1.65
USP15-213ENST00000549268 GALNTL5Q7Z4T8 443 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 LGI2Q8N0V4 545 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 MAPKAPK5-AS1Q8N8E1 139 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 IQUBQ8NA54 791 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
USP15-213ENST00000549268 SPATA17Q96L03 361 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 FER1L6-AS2Q96M78 137 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 PGLYRP2Q96PD5 576 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 GTPBP2Q9BX10 602 aaKnown RBP4.72□□□□□ -1.65
USP15-213ENST00000549268 ST6GALNAC4Q9H4F1 302 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 CDH20Q9HBT6 801 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 SIX2Q9NPC8 291 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 SDR39U1Q9NRG7 319 aaPredicted RBP4.72□□□□□ -1.65
USP15-213ENST00000549268 FGF21Q9NSA1 209 aa4.72□□□□□ -1.65
USP15-213ENST00000549268 ARHGEF37A1IGU5 675 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 PRR23AA6NEV1 266 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 ENO4A6NNW6 628 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 ERVV-2B6SEH9 535 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 AP5Z1O43299 807 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 IRF2P14316 349 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 MYL6BP14649 208 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 CD22P20273 847 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 PTAFRP25105 342 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 LIMK1P53667 647 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 TUBB4BP68371 445 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 MAT1AQ00266 395 aaKnown RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 MZT1Q08AG7 82 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 SCARB2Q14108 478 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 KRTAP24-1Q3LI83 254 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 CCDC92Q53HC0 331 aaPredicted RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 C20orf194Q5TEA3 1177 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 SHQ1Q6PI26 577 aaKnown RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 SLC16A9Q7RTY1 509 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 DNAJB7Q7Z6W7 309 aaPredicted RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 ZNF329Q86UD4 541 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 MAML2Q8IZL2 1156 aaPredicted RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 RYBPQ8N488 228 aaPredicted RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 Q8NFD4 153 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 OR4K1Q8NGD4 311 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 SUSD6Q92537 303 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 EXT2Q93063 718 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 F2RL3Q96RI0 385 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 EGFL8Q99944 293 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 FERMT1Q9BQL6 677 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 DESI2Q9BSY9 194 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 FSD1Q9BTV5 496 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 GRPEL1Q9HAV7 217 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 XAB2Q9HCS7 855 aaKnown RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 ZNF701Q9NV72 531 aaPredicted RBP4.71□□□□□ -1.66
USP15-213ENST00000549268 FLRT3Q9NZU0 649 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 TXNDC16Q9P2K2 825 aa4.71□□□□□ -1.66
USP15-213ENST00000549268 PTGESO14684 152 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 SLC22A2O15244 555 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 TRMUO75648 421 aaKnown RBP4.7□□□□□ -1.66
USP15-213ENST00000549268 RECQL5O94762 991 aaPredicted RBP4.7□□□□□ -1.66
USP15-213ENST00000549268 HMBSP08397 361 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 QDPRP09417 244 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 FRMD6-AS1P0C7T7 363 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 PRSS56P0CW18 603 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 CA6P23280 308 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 CSTF2P33240 577 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP15-213ENST00000549268 PTGER4P35408 488 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 HERV-K104P61576 105 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 GPR17Q13304 367 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 PPIGQ13427 754 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP15-213ENST00000549268 HYAL4Q2M3T9 481 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 UGT3A2Q3SY77 523 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 C15orf39Q6ZRI6 1047 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 CCAR2Q8N163 923 aaKnown RBP4.7□□□□□ -1.66
USP15-213ENST00000549268 OLIG1Q8TAK6 271 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 SETD6Q8TBK2 473 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 MUS81Q96NY9 551 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 DUX3Q96PT4 197 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 ZWILCHQ9H900 591 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 FAM207AQ9NSI2 230 aaPredicted RBP4.7□□□□□ -1.66
USP15-213ENST00000549268 INTS9Q9NV88 658 aaKnown RBP4.7□□□□□ -1.66
USP15-213ENST00000549268 STUB1Q9UNE7 303 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 TNNQ9UQP3 1299 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 SNX5Q9Y5X3 404 aa4.7□□□□□ -1.66
USP15-213ENST00000549268 SMCHD1A6NHR9 2005 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 HHLA1C9JL84 531 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 SOCS5O75159 536 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 RPS6KA5O75582 802 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 AMBPP02760 352 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 CD48P09326 243 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 ERVK-10P10266 1014 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 HOXC8P31273 242 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 HOXC13P31276 330 aa4.69□□□□□ -1.66
USP15-213ENST00000549268 MAZP56270 477 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms