RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 KIF19Q2TAC6 998 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 C6orf136Q5SQH8 315 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 LIPJQ5W064 366 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 GK5Q6ZS86 529 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 GALNT13Q8IUC8 556 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 DCUN1D3Q8IWE4 304 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 SFRP1Q8N474 314 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 ZNF480Q8WV37 535 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 HMGB4Q8WW32 186 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 PPP3R2Q96LZ3 170 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 BRINP2Q9C0B6 783 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 FZD3Q9NPG1 666 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 TM7SF3Q9NS93 570 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 NDE1Q9NXR1 346 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 KLQ9UEF7 1012 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 EBF1Q9UH73 591 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 CA14Q9ULX7 337 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 SNX6Q9UNH7 406 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 GPR45Q9Y5Y3 372 aa9.06□□□□□ -0.96
GNE-206ENST00000543356 LATO43561 262 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 ULK1O75385 1050 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 WFS1O76024 890 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 SEMA4FO95754 770 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 JUPP14923 745 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 CD1EP15812 388 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 KELP23276 732 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 EMX2Q04743 252 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 STX5Q13190 355 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 NAE1Q13564 534 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 E2F2Q14209 437 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 NFATC4Q14934 902 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 PDCD4Q53EL6 469 aaKnown RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 AGKQ53H12 422 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 PYCR3Q53H96 274 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 SCIMPQ6UWF3 145 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 C16orf89Q6UX73 402 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 SLC25A23Q9BV35 468 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 SGPP1Q9BX95 441 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 INTS7Q9NVH2 962 aaKnown RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 ZNF490Q9ULM2 529 aaPredicted RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 ATG2BQ96BY7 2078 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 KANSL1LA0AUZ9 987 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 BBIP1A8MTZ0 92 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 NPIPB8E9PQR5 432 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 IFRD1O00458 451 aaPredicted RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 TOR1BO14657 336 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 FFAR3O14843 346 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 GPR42O15529 346 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 FUCA1P04066 466 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 SNRPB2P08579 225 aaKnown RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 SLC35G4P0C7Q5 338 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 ERGP11308 486 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 PRPH2P23942 346 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 OXTRP30559 389 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 CCR5P51681 352 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 PNLIPRP1P54315 467 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 STARD6P59095 220 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 TBPL1P62380 186 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 SLC25A3Q00325 362 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 NR6A1Q15406 480 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 WASHC2DQ5SRD0 308 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 PRPF38BQ5VTL8 546 aaKnown RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 CAPN13Q6MZZ7 669 aaPredicted RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 ADHFE1Q8IWW8 467 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 LRRC56Q8IYG6 542 aaPredicted RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 KYQ8NBH2 561 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 OR5K2Q8NHB8 316 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 TFGQ92734 400 aaPredicted RBP9.05□□□□□ -0.96
GNE-206ENST00000543356 RAD51AP1Q96B01 352 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 RCN3Q96D15 328 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 MED8Q96G25 268 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 OR4K3Q96R72 315 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 EFCAB1Q9HAE3 211 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 LMAN1LQ9HAT1 526 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 ASIC5Q9NY37 505 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 ZIM2Q9NZV7 527 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 ASF1AQ9Y294 204 aa9.05□□□□□ -0.96
GNE-206ENST00000543356 E7EQ34 232 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PRAMEF4O60810 478 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 APBB3O95704 486 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 ACP5P13686 325 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CCND1P24385 295 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 AKT2P31751 481 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 HSD17B2P37059 387 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 HNF4AP41235 474 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 HALP42357 657 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CASP2P42575 452 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 NUDT2P50583 147 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 YPEL5P62699 121 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CHIT1Q13231 466 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 MAD2L1Q13257 205 aaPredicted RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 ARHGAP19Q14CB8 494 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PRAMEF9Q5VWM5 478 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 GRHL2Q6ISB3 625 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PAOXQ6QHF9 649 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 GCNT7Q6ZNI0 430 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 FUNDC1Q8IVP5 155 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms