RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TRIM71Q2Q1W2 868 aaKnown RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 INAVAQ3KP66 663 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 PLEKHG6Q3KR16 790 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 GPRC6AQ5T6X5 926 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 TMEM236Q5W0B7 351 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 TTC23LQ6PF05 361 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 SLC24A5Q71RS6 500 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 LACC1Q8IV20 430 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 DENND1CQ8IV53 801 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ZBTB2Q8N680 514 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 BEND7Q8N7W2 519 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 CLHC1Q8NHS4 586 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 RHOXF1Q8NHV9 184 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 LKAAEAR1Q8TD35 194 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 IPCEF1Q8WWN9 437 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 TESCQ96BS2 214 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 CCDC97Q96F63 343 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 FAM193BQ96PV7 902 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 C19orf43Q9BQ61 176 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 ACOT13Q9NPJ3 140 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 LHX3Q9UBR4 397 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 OSGIN1Q9UJX0 560 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 NDRG4Q9ULP0 352 aaKnown RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 PCDHB9Q9Y5E1 797 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 GPC6Q9Y625 555 aaPredicted RBP9.43□□□□□ -0.9
CDH13-204ENST00000539548 PRSS21Q9Y6M0 314 aa9.43□□□□□ -0.9
CDH13-204ENST00000539548 CLDN24A6NM45 220 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 GAPDHSO14556 408 aaPredicted RBP9.42□□□□□ -0.9
CDH13-204ENST00000539548 TSPAN3O60637 253 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 STK16O75716 305 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 SEMG1P04279 462 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 GSNP06396 782 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 CYBAP13498 195 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 EFNA1P20827 205 aaPredicted RBP9.42□□□□□ -0.9
CDH13-204ENST00000539548 FPR1P21462 350 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 PSMB9P28065 219 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 HOXD12P35452 270 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 SGSHP51688 502 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 PPP5CP53041 499 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 FCGRTP55899 365 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 SMARCB1Q12824 385 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 LYPLAL1Q5VWZ2 237 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 C17orf99Q6UX52 265 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 MSANTD1Q6ZTZ1 278 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 SERPINA11Q86U17 422 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 TTC29Q8NA56 475 aaPredicted RBP9.42□□□□□ -0.9
CDH13-204ENST00000539548 ZNF540Q8NDQ6 660 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 OR10Q1Q8NGQ4 319 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 MTFMTQ96DP5 389 aaKnown RBP9.42□□□□□ -0.9
CDH13-204ENST00000539548 LGALS12Q96DT0 336 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 SIGLEC11Q96RL6 698 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 BOCQ9BWV1 1114 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 ACPTQ9BZG2 426 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 SLIRPQ9GZT3 109 aaKnown RBP9.42□□□□□ -0.9
CDH13-204ENST00000539548 EPS8L2Q9H6S3 715 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 CWH43Q9H720 699 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 PARVBQ9HBI1 364 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 ANKMY1Q9P2S6 941 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 AASSQ9UDR5 926 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 ABCG2Q9UNQ0 655 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 DLGAP4Q9Y2H0 992 aa9.42□□□□□ -0.9
CDH13-204ENST00000539548 TRBV5-4A0A0C4DH59 114 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 E9PQ18 207 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 H0Y626 953 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 KDM1AO60341 852 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 FAM20BO75063 409 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 FKBP9O95302 570 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 TRIM16O95361 564 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 GJB5O95377 273 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 ZNF682O95780 498 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 PDYNP01213 254 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 KLKB1P03952 638 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 PRPH2P23942 346 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CD40LGP29965 261 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 ALDH4A1P30038 563 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 HOXA9P31269 272 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CA5AP35218 305 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CDKN2CP42773 168 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 TRPC1P48995 793 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 NCS1P62166 190 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CSNK2BP67870 215 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 TWF1Q12792 350 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CDC20Q12834 499 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 DUSP4Q13115 394 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 DNASE1L3Q13609 305 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 GTF2H3Q13889 308 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 TAF1CQ15572 869 aaPredicted RBP9.41□□□□□ -0.9
CDH13-204ENST00000539548 INO80DQ53TQ3 878 aaPredicted RBP9.41□□□□□ -0.9
CDH13-204ENST00000539548 CDKL4Q5MAI5 379 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CXorf57Q6NSI4 855 aaKnown RBP9.41□□□□□ -0.9
CDH13-204ENST00000539548 DOK6Q6PKX4 331 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 FAM151BQ6UXP7 276 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 RSPO2Q6UXX9 243 aaPredicted RBP9.41□□□□□ -0.9
CDH13-204ENST00000539548 MACC1Q6ZN28 852 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 CCDC81Q6ZN84 652 aa9.41□□□□□ -0.9
CDH13-204ENST00000539548 PAGE2Q7Z2X7 111 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms