RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-209	ENST00000534131	NCF1	P14598	390 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	POLR2C	P19387	275 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CD1C	P29017	333 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	OAS2	P29728	719 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CRHR1	P34998	444 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CAPZB	P47756	277 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	ARL4D	P49703	201 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	SLC18A2	Q05940	514 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CYP2A13	Q16696	494 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	PHKG1	Q16816	387 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	TECRL	Q5HYJ1	363 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	LCE2D	Q5TA82	110 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	AGBL2	Q5U5Z8	902 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	TMEM71	Q6P5X7	295 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	WDR74	Q6RFH5	385 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	AGTRAP	Q6RW13	159 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	RBM44	Q6ZP01	1051 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	USP53	Q70EK8	1073 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CLEC14A	Q86T13	490 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	RASGRP3	Q8IV61	690 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	PLD6	Q8N2A8	252 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	HMGCLL1	Q8TB92	370 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	JPH3	Q8WXH2	748 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	PTER	Q96BW5	349 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	MED8	Q96G25	268 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	APOPT1	Q96IL0	206 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	TMEM74	Q96NL1	305 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	IL17F	Q96PD4	163 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	DEPDC7	Q96QD5	511 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CD180	Q99467	661 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	TMBIM4	Q9HC24	238 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	INTS7	Q9NVH2	962 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	ACTR10	Q9NZ32	417 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	STOX2	Q9P2F5	926 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CPSF2	Q9P2I0	782 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	EPHA6	Q9UF33	1036 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	CIDEB	Q9UHD4	219 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	PCDHB11	Q9Y5F2	797 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	ACTL7B	Q9Y614	415 aa		11.43	□□□□□ -0.58
CTSC-209	ENST00000534131	SNRNP200	O75643	2136 aa	Known RBP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	HEATR5B	Q9P2D3	2071 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ACACB	O00763	2458 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	PTPRB	P23467	1997 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CAPN5	O15484	640 aa	Predicted RBP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	RASSF9	O75901	435 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	SLC16A8	O95907	504 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CDH3	P22223	829 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	IMPA1	P29218	277 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CMPK1	P30085	196 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	GRB7	Q14451	532 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	OR4D1	Q15615	310 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	SF1	Q15637	639 aa	Known RBP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	PPP1R3A	Q16821	1122 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CCSMST1	Q4G0I0	132 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	NKAIN2	Q5VXU1	208 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	SLC22A9	Q8IVM8	553 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CARF	Q8N187	725 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	GALNT15	Q8N3T1	639 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	FBXO39	Q8N4B4	442 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	OR4D9	Q8NGE8	314 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ZNF480	Q8WV37	535 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	RSC1A1	Q92681	617 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	DLG3	Q92796	817 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CCDC126	Q96EE4	140 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ATOH8	Q96SQ7	321 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	MIPEP	Q99797	713 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	HAUS8	Q9BT25	410 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	CAPS2	Q9BXY5	557 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	STRADB	Q9C0K7	418 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ATG10	Q9H0Y0	220 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	SSU72	Q9NP77	194 aa	Known RBP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	KCNK9	Q9NPC2	374 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ABCF3	Q9NUQ8	709 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ZNF358	Q9NW07	568 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	MKS1	Q9NXB0	559 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	XPR1	Q9UBH6	696 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	DYRK1B	Q9Y463	629 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	ANGPTL3	Q9Y5C1	460 aa		11.42	□□□□□ -0.58
CTSC-209	ENST00000534131	TNPO3	Q9Y5L0	923 aa	Known RBP	11.42	□□□□□ -0.58
CTSC-209	ENST00000534131		A0A1W2PQM1	296 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	UBXN8	O00124	270 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	BTN3A3	O00478	584 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	NTN3	O00634	580 aa	Predicted RBP	11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	MAP2K7	O14733	419 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	TOX3	O15405	576 aa	Predicted RBP	11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	SPAG7	O75391	227 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	MYL2	P10916	166 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	ERG	P11308	486 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	PRDX3	P30048	256 aa	Known RBP	11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	GMPR	P36959	345 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	ABAT	P80404	500 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	ASPH	Q12797	758 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	NAE1	Q13564	534 aa		11.41	□□□□□ -0.58
CTSC-209	ENST00000534131	SLC5A12	Q1EHB4	618 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms